Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K10
(391 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal d... 55 9e-08
BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein. 55 9e-08
AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1... 55 9e-08
AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD p... 53 3e-07
BC015010-1|AAH15010.1| 565|Homo sapiens Unknown (protein for IM... 52 5e-07
AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containi... 33 0.43
AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containi... 33 0.43
AY131227-1|AAN07913.1| 611|Homo sapiens medulloblastoma antigen... 33 0.43
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 31 1.8
BC072400-1|AAH72400.1| 414|Homo sapiens THOC2 protein protein. 31 1.8
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 31 1.8
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 31 1.8
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 31 1.8
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 31 1.8
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 31 1.8
AL030996-5|CAI42273.1| 387|Homo sapiens THO complex 2 protein. 31 1.8
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 31 1.8
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 31 1.8
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 31 1.8
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 31 1.8
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 30 2.3
BC038588-1|AAH38588.1| 1158|Homo sapiens AE binding protein 1 pr... 30 3.1
AF053944-1|AAC25585.1| 1158|Homo sapiens aortic carboxypeptidase... 30 3.1
AB209744-1|BAD92981.1| 1172|Homo sapiens adipocyte enhancer bind... 30 3.1
X94333-1|CAA64002.1| 437|Homo sapiens TGN46 protein. 29 7.1
BC028219-1|AAH28219.1| 447|Homo sapiens TGOLN2 protein protein. 29 7.1
BC008461-1|AAH08461.1| 437|Homo sapiens trans-golgi network pro... 29 7.1
AK223063-1|BAD96783.1| 437|Homo sapiens trans-golgi network pro... 29 7.1
AK222829-1|BAD96549.1| 437|Homo sapiens trans-golgi network pro... 29 7.1
AC093162-2|AAY24095.1| 447|Homo sapiens unknown protein. 29 7.1
BC088355-1|AAH88355.1| 682|Homo sapiens TARS protein protein. 28 9.3
BC010578-1|AAH10578.2| 723|Homo sapiens threonyl-tRNA synthetas... 28 9.3
BC000517-1|AAH00517.2| 723|Homo sapiens threonyl-tRNA synthetas... 28 9.3
AK222804-1|BAD96524.1| 723|Homo sapiens threonyl-tRNA synthetas... 28 9.3
>BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal
domain, RNA polymerase II, polypeptide A) phosphatase,
su protein.
Length = 867
Score = 54.8 bits (126), Expect = 9e-08
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 3 DDREDVWRHATNLIHVRPYSFFQSTGDINAPPPVEE 110
DDREDVW+ A NLI V+ Y +FQ TGD+NAPP E
Sbjct: 302 DDREDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRE 337
>BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein.
Length = 874
Score = 54.8 bits (126), Expect = 9e-08
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 3 DDREDVWRHATNLIHVRPYSFFQSTGDINAPPPVEE 110
DDREDVW+ A NLI V+ Y +FQ TGD+NAPP E
Sbjct: 215 DDREDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRE 250
>AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1a
protein.
Length = 842
Score = 54.8 bits (126), Expect = 9e-08
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 3 DDREDVWRHATNLIHVRPYSFFQSTGDINAPPPVEE 110
DDREDVW+ A NLI V+ Y +FQ TGD+NAPP E
Sbjct: 183 DDREDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRE 218
>AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD
phosphatase protein.
Length = 961
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 3 DDREDVWRHATNLIHVRPYSFFQSTGDINAPPPVEE 110
DDR+DVW+ A NLI V+ Y +FQ TGD+NAPP E
Sbjct: 302 DDRKDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRE 337
>BC015010-1|AAH15010.1| 565|Homo sapiens Unknown (protein for
IMAGE:4864552) protein.
Length = 565
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3
Query: 6 DREDVWRHATNLIHVRPYSFFQSTGDINAPPPVEE 110
DREDVW+ A NLI V+ Y +FQ TGD+NAPP E
Sbjct: 1 DREDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRE 35
>AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containing
cofactor-1 protein.
Length = 2663
Score = 32.7 bits (71), Expect = 0.43
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 99 PVEEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKE 260
P EEK LR+ K + K+ P+ LE + + K+DK+ KE+ K D K+ KE
Sbjct: 753 PKEEK--LRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKE 805
>AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containing
protein protein.
Length = 2664
Score = 32.7 bits (71), Expect = 0.43
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 99 PVEEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKE 260
P EEK LR+ K + K+ P+ LE + + K+DK+ KE+ K D K+ KE
Sbjct: 754 PKEEK--LRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKE 806
>AY131227-1|AAN07913.1| 611|Homo sapiens medulloblastoma antigen
MU-MB-20.240 protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.43
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 99 PVEEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKE 260
P EEK LR+ K + K+ P+ LE + + K+DK+ KE+ K D K+ KE
Sbjct: 372 PKEEK--LRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKE 424
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 72 STGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKI 251
S D PP + ++ K G G E P P +KD KE+NK+ S K
Sbjct: 1486 SNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKD----KEKNKSKSSGKEKG 1541
Query: 252 VKEMKSNK 275
KS K
Sbjct: 1542 SDSFKSEK 1549
>BC072400-1|AAH72400.1| 414|Homo sapiens THOC2 protein protein.
Length = 414
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 72 STGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKI 251
S D PP + ++ K G G E P P +KD KE+NK+ S K
Sbjct: 307 SNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKD----KEKNKSKSSGKEKG 362
Query: 252 VKEMKSNK 275
KS K
Sbjct: 363 SDSFKSEK 370
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNT 281
EEK KL + KE+ T ++ + +Q+D + K++NK S + K VKE + +K T
Sbjct: 567 EEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDK-VKEKEKDKET 625
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNT 281
EEK KL + KE+ T ++ + +Q+D + K++NK S + K VKE + +K T
Sbjct: 510 EEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDK-VKEKEKDKET 568
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNT 281
EEK KL + KE+ T ++ + +Q+D + K++NK S + K VKE + +K T
Sbjct: 510 EEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDK-VKEKEKDKET 568
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNT 281
EEK KL + KE+ T ++ + +Q+D + K++NK S + K VKE + +K T
Sbjct: 510 EEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDK-VKEKEKDKET 568
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNT 281
EEK KL + KE+ T ++ + +Q+D + K++NK S + K VKE + +K T
Sbjct: 488 EEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDK-VKEKEKDKET 546
>AL030996-5|CAI42273.1| 387|Homo sapiens THO complex 2 protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 72 STGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKI 251
S D PP + ++ K G G E P P +KD KE+NK+ S K
Sbjct: 280 SNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKD----KEKNKSKSSGKEKG 335
Query: 252 VKEMKSNK 275
KS K
Sbjct: 336 SDSFKSEK 343
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 72 STGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKI 251
S D PP + ++ K G G E P P +KD KE+NK+ S K
Sbjct: 1486 SNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKD----KEKNKSKSSGKEKG 1541
Query: 252 VKEMKSNK 275
KS K
Sbjct: 1542 SDSFKSEK 1549
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 72 STGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKI 251
S D PP + ++ K G G E P P +KD KE+NK+ S K
Sbjct: 1486 SNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKD----KEKNKSKSSGKEKG 1541
Query: 252 VKEMKSNK 275
KS K
Sbjct: 1542 SDSFKSEK 1549
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPT-LEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNT 281
EEK KL + KE+ T ++ + +Q+D + K++NK S + K VKE + +K T
Sbjct: 510 EEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDK-VKEKEKDKET 568
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 72 STGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKI 251
S D PP + ++ K G G E P P +KD KE+NK+ S K
Sbjct: 1371 SNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKD----KEKNKSKSSGKEKG 1426
Query: 252 VKEMKSNK 275
KS K
Sbjct: 1427 SDSFKSEK 1434
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 93 PPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSN 272
PPP + R G + A E +L +PE +D K N+ +NG++ ++ N
Sbjct: 4 PPPSGSRRHRRRGVRKFKMAAAETQSLREQPEMEDANSEKSINE----ENGEVSEDQSQN 59
Query: 273 KNT 281
K++
Sbjct: 60 KHS 62
>BC038588-1|AAH38588.1| 1158|Homo sapiens AE binding protein 1
protein.
Length = 1158
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 81 DINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKE 260
D+ APPP E ++R + G + + E PE+ DK ++ K + G K+ KE
Sbjct: 53 DVEAPPPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDK--GKKGKKDKGP--KVPKE 108
>AF053944-1|AAC25585.1| 1158|Homo sapiens aortic
carboxypeptidase-like protein ACLP protein.
Length = 1158
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 81 DINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKE 260
D+ APPP E ++R + G + + E PE+ DK ++ K + G K+ KE
Sbjct: 53 DVEAPPPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDK--GKKGKKDKGP--KVPKE 108
>AB209744-1|BAD92981.1| 1172|Homo sapiens adipocyte enhancer binding
protein 1 precursor variant protein.
Length = 1172
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 81 DINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKE 260
D+ APPP E ++R + G + + E PE+ DK ++ K + G K+ KE
Sbjct: 67 DVEAPPPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDK--GKKGKKDKGP--KVPKE 122
>X94333-1|CAA64002.1| 437|Homo sapiens TGN46 protein.
Length = 437
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P + KL KT SG+ ++ + + PTE VEPK
Sbjct: 273 KELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSS-------EPTEDVEPKE 325
Query: 336 VETDD 350
E DD
Sbjct: 326 AEDDD 330
>BC028219-1|AAH28219.1| 447|Homo sapiens TGOLN2 protein protein.
Length = 447
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P + KL KT SG+ ++ + + PTE VEPK
Sbjct: 273 KELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSS-------EPTEDVEPKE 325
Query: 336 VETDD 350
E DD
Sbjct: 326 AEDDD 330
>BC008461-1|AAH08461.1| 437|Homo sapiens trans-golgi network
protein 2 protein.
Length = 437
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P + KL KT SG+ ++ + + PTE VEPK
Sbjct: 273 KELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSS-------EPTEDVEPKE 325
Query: 336 VETDD 350
E DD
Sbjct: 326 AEDDD 330
>AK223063-1|BAD96783.1| 437|Homo sapiens trans-golgi network
protein 2 variant protein.
Length = 437
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P + KL KT SG+ ++ + + PTE VEPK
Sbjct: 273 KELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSS-------EPTEDVEPKE 325
Query: 336 VETDD 350
E DD
Sbjct: 326 AEDDD 330
>AK222829-1|BAD96549.1| 437|Homo sapiens trans-golgi network
protein 2 variant protein.
Length = 437
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P + KL KT SG+ ++ + + PTE VEPK
Sbjct: 273 KELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSS-------EPTEDVEPKE 325
Query: 336 VETDD 350
E DD
Sbjct: 326 AEDDD 330
>AC093162-2|AAY24095.1| 447|Homo sapiens unknown protein.
Length = 447
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P + KL KT SG+ ++ + + PTE VEPK
Sbjct: 273 KELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSS-------EPTEDVEPKE 325
Query: 336 VETDD 350
E DD
Sbjct: 326 AEDDD 330
>BC088355-1|AAH88355.1| 682|Homo sapiens TARS protein protein.
Length = 682
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGK 248
EEKA GK G +E P E +QK+ K++NK SGD G+
Sbjct: 3 EEKASSPSGKMGG----EEKPIGAGEEKQKEGG--KKKNKEGSGDGGR 44
>BC010578-1|AAH10578.2| 723|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 723
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGK 248
EEKA GK G +E P E +QK+ K++NK SGD G+
Sbjct: 3 EEKASSPSGKMGG----EEKPIGAGEEKQKEGG--KKKNKEGSGDGGR 44
>BC000517-1|AAH00517.2| 723|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 723
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGK 248
EEKA GK G +E P E +QK+ K++NK SGD G+
Sbjct: 3 EEKASSPSGKMGG----EEKPIGAGEEKQKEGG--KKKNKEGSGDGGR 44
>AK222804-1|BAD96524.1| 723|Homo sapiens threonyl-tRNA synthetase
variant protein.
Length = 723
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 105 EEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGK 248
EEKA GK G +E P E +QK+ K++NK SGD G+
Sbjct: 3 EEKASSPSGKMGG----EEKPIGAGEEKQKEGG--KKKNKEGSGDGGR 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,858,277
Number of Sequences: 237096
Number of extensions: 589826
Number of successful extensions: 3439
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3418
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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