Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K10
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   6.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   8.7  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 374 RILYFYLSVVSFYPFRFDW 318
           R+LY Y     +YP   +W
Sbjct: 290 RLLYVYAQESDYYPDLNEW 308


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 89  RSASC*GKSETTNR*KRCPVRLKRNAHVR 175
           R+A   G S T +R  RC      NAH+R
Sbjct: 133 RAACHSGSSLTKSRLMRCLHHDIENAHIR 161


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +3

Query: 129 GKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKN 278
           G +    ALK+M   +    ++   ++ E+      D   +VK  K+ K+
Sbjct: 388 GDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVKLFKTFKD 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,455
Number of Sequences: 438
Number of extensions: 1348
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)