Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K10
(391 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17550.1 68416.m02241 NLI interacting factor (NIF) family pro... 34 0.039
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 33 0.051
At5g53930.1 68418.m06710 expressed protein 33 0.068
At3g19600.1 68416.m02485 NLI interacting factor (NIF) family pro... 31 0.21
At1g56660.1 68414.m06516 expressed protein 31 0.36
At5g28400.1 68418.m03448 expressed protein 29 0.84
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 29 1.1
At5g58000.1 68418.m07256 phosphatase-related weak similarity to ... 28 1.9
At5g47940.1 68418.m05922 expressed protein 28 1.9
At4g21800.2 68417.m03154 ATP-binding family protein contains Pfa... 28 1.9
At4g21800.1 68417.m03153 ATP-binding family protein contains Pfa... 28 1.9
At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof... 27 3.4
At3g07310.1 68416.m00871 expressed protein 27 3.4
At2g17500.3 68415.m02024 auxin efflux carrier family protein con... 27 3.4
At2g17500.2 68415.m02023 auxin efflux carrier family protein con... 27 3.4
At2g17500.1 68415.m02022 auxin efflux carrier family protein con... 27 3.4
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 27 4.5
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 27 5.9
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 27 5.9
At2g36190.1 68415.m04442 beta-fructosidase, putative / beta-fruc... 27 5.9
At2g17787.1 68415.m02061 expressed protein 26 7.8
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 26 7.8
At1g24120.1 68414.m03043 DNAJ heat shock protein, putative simil... 26 7.8
>At3g17550.1 68416.m02241 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 296
Score = 33.9 bits (74), Expect = 0.039
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 DDREDVW-RHATNLIHVRPYSFFQSTGDINAPPPVEEKAKLRIGKNGARCALK 158
DD DVW H +NL+ + Y FF+ G + EEK G LK
Sbjct: 207 DDTSDVWTHHKSNLVEINEYHFFRVNGPEESNSYTEEKRDESKNNGGLANVLK 259
>At1g80810.1 68414.m09481 expressed protein similar to
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]; similar
to bimD (GI:168025) [Emericella nidulans]
Length = 826
Score = 33.5 bits (73), Expect = 0.051
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 180 EPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKWVETDDGQI 359
E E +DD K+ + G + +E K N+ + +E EPKW ETDD +
Sbjct: 717 EQEYEDDCSDKKEQSQDKGVEAETKEEEKQYPNSEGESEGEDSESEE-EPKWRETDDMED 775
Query: 360 EIEDPDD 380
+ E+ ++
Sbjct: 776 DEEEEEE 782
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 33.1 bits (72), Expect = 0.068
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 111 KAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKERNKTNSGDN--GKIVKEMKSNKNTX 284
+ K R K + + K + E++ + DD+L+K++ ++ D GK K++ S K
Sbjct: 60 RKKKRRSKLSKKRSRKRYSSSESDDDSDDDRLLKKKKRSKRKDENVGKKKKKVVSRKRRK 119
Query: 285 XXXXXXERPTEPVEPKWVETDDGQ 356
+E + E+DDG+
Sbjct: 120 RDLSSSSTSSEQSDNDGSESDDGK 143
>At3g19600.1 68416.m02485 NLI interacting factor (NIF) family
protein low similarity to CTD phosphatase [Xenopus
laevis] GI:13487713; contains Pfam profile PF03031: NLI
interacting factor
Length = 601
Score = 31.5 bits (68), Expect = 0.21
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 DDREDVWR-HATNLIHVRPYSFFQSTGDINAPPPVEEKAKLRIGKNGARCALK 158
DD +VW H +NL+ + YS+F+ G ++ P EEK + G LK
Sbjct: 512 DDTRNVWPDHKSNLVDISKYSYFRLKGQ-DSMPYSEEKTDESESEGGLANVLK 563
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 30.7 bits (66), Expect = 0.36
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 174 EAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXE-RPTEPVEPKWVETDD 350
EAE +++DD K+++K G++ + K+ K +K E + TE E K ++ D
Sbjct: 402 EAEKKEEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDSKD 461
Query: 351 GQIE 362
+IE
Sbjct: 462 VKIE 465
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 29.5 bits (63), Expect = 0.84
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = +3
Query: 150 ALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEP 329
A K ++++P++ D + + E G + +E+KS K++ E+ +
Sbjct: 517 ARKHKLDVDSQPQKNDYQKLSETGNAVKGSSSNKREELKSAKSSSGGTEHIEKEEPSGKE 576
Query: 330 KWVETDDGQIEIE 368
W+E + +E
Sbjct: 577 NWIEKTTMNLSLE 589
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = +3
Query: 150 ALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEP 329
A K ++++P++ D + + E G + +E+KS K++ E+ +
Sbjct: 506 ARKHKLDVDSQPQKNDYQKLSETGTAVKGSSSNKREELKSAKSSSGGTEHIEKEEPSGKE 565
Query: 330 KWVETDDGQIEIE 368
W+E + +E
Sbjct: 566 NWIEKTTMNLSLE 578
>At5g58000.1 68418.m07256 phosphatase-related weak similarity to CTD
phosphatase-like 3 [Arabidopsis thaliana] GI:22212705;
contains Pfam profiles PF02453: Reticulon, PF00533:
BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting
factor
Length = 1011
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 DDREDVW-RHATNLIHVRPYSFFQST 77
DD E+ W +H NLI + Y FF S+
Sbjct: 824 DDTENAWPKHKDNLIVIERYHFFSSS 849
>At5g47940.1 68418.m05922 expressed protein
Length = 749
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +3
Query: 3 DDREDVWRHATNLIHVRPYSFFQSTGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAE 182
DD +V +L++ F+++T +IN P + RCAL + + A+
Sbjct: 154 DDWVEVKASDDSLLNNEKQDFYEATAEINDAEPCTSITVRLLSLQDKRCALVDEVYVFAD 213
Query: 183 PEQKDDKLIKERNKTNSGDNGKIV 254
P + +E T + + ++
Sbjct: 214 PVDPSESEKEEATGTGNSSSSSLM 237
>At4g21800.2 68417.m03154 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 379
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 162 MPTLEAEPEQK--DDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
M T +A+ + + D + ++E K + + K+ K+M+S++ + + E
Sbjct: 288 METYKADLDMRKADKERLEEERKKHEME--KLRKDMESSQGGTVVLNTGLKDRDATEKMM 345
Query: 336 VETDDGQIEIEDPDD 380
+E DD ++ED +D
Sbjct: 346 LEEDDEDFQVEDEED 360
>At4g21800.1 68417.m03153 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 379
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 162 MPTLEAEPEQK--DDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
M T +A+ + + D + ++E K + + K+ K+M+S++ + + E
Sbjct: 288 METYKADLDMRKADKERLEEERKKHEME--KLRKDMESSQGGTVVLNTGLKDRDATEKMM 345
Query: 336 VETDDGQIEIEDPDD 380
+E DD ++ED +D
Sbjct: 346 LEEDDEDFQVEDEED 360
>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 662
Score = 27.5 bits (58), Expect = 3.4
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +3
Query: 150 ALKEMPTLEAEPEQKDDKLIKERNKTNSG---DNGKIVKEMKSNKNTXXXXXXXERP-TE 317
ALK +PT E + + D++ E K + ++GK + + S+ ++ E
Sbjct: 85 ALKHIPTEEIQENMQTDEVEDENEKEEASEEEESGKSSRTLGSDSDSEETETNKELACAN 144
Query: 318 PVEPKWVETDDGQIEIEDPDD 380
PVE + DDG IE+ ++
Sbjct: 145 PVE-EVERQDDGLAVIEEEEE 164
>At3g07310.1 68416.m00871 expressed protein
Length = 368
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 136 FLPIRSFAFSSTGGGAFISPVD*KNEY 56
FLP RS S GGG F+ P K +Y
Sbjct: 13 FLPSRSRRQSGDGGGGFVIPAKRKIQY 39
>At2g17500.3 68415.m02024 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 396
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 45 HVRPYSFFQSTGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKER 218
++ Y+F G +EE K+ I + + L PE K++K++KE+
Sbjct: 159 YIWTYTFRLIKGSAMKVQAIEESEKIAIKSSNSDLEADHKTHLLGAPEDKENKVVKEK 216
>At2g17500.2 68415.m02023 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 396
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 45 HVRPYSFFQSTGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKER 218
++ Y+F G +EE K+ I + + L PE K++K++KE+
Sbjct: 159 YIWTYTFRLIKGSAMKVQAIEESEKIAIKSSNSDLEADHKTHLLGAPEDKENKVVKEK 216
>At2g17500.1 68415.m02022 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 396
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 45 HVRPYSFFQSTGDINAPPPVEEKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIKER 218
++ Y+F G +EE K+ I + + L PE K++K++KE+
Sbjct: 159 YIWTYTFRLIKGSAMKVQAIEESEKIAIKSSNSDLEADHKTHLLGAPEDKENKVVKEK 216
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = +3
Query: 153 LKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTE 317
+KE+ + E ++K+ + KER+++ D G + +E + ++N E+ E
Sbjct: 91 VKELQDMLREKKRKERDMEKERDRSKENDKG-VEREHEGDRNRAKEKDRHEKQKE 144
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 26.6 bits (56), Expect = 5.9
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P E + E+ + + SG+ +IV+E K + ++P VE K
Sbjct: 137 KEIPVEEVKAEEPAKTEEPAKTEGTSGEKEEIVEETKKGETPETAVVEEKKP--EVEEKK 194
Query: 336 VETDDGQIEIEDP 374
E +E P
Sbjct: 195 EEATPAPAVVETP 207
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 26.6 bits (56), Expect = 5.9
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 156 KEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKW 335
KE+P E + E+ + + SG+ +IV+E K + ++P VE K
Sbjct: 137 KEIPVEEVKAEEPAKTEEPAKTEGTSGEKEEIVEETKKGETPETAVVEEKKP--EVEEKK 194
Query: 336 VETDDGQIEIEDP 374
E +E P
Sbjct: 195 EEATPAPAVVETP 207
>At2g36190.1 68415.m04442 beta-fructosidase, putative /
beta-fructofuranosidase, putative similar to
beta-fructofuranosidase GI:18324 from [Daucus carota]
Length = 591
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 303 ERPTEPVEPKWVETDDGQIEIED 371
E P++P KW++ DD I I D
Sbjct: 156 EDPSDPYLRKWIKPDDNPIAIPD 178
>At2g17787.1 68415.m02061 expressed protein
Length = 324
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +3
Query: 147 CALKEMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPT 314
C K + + KL KE+ S DN K+ KE K + E+PT
Sbjct: 173 CQEKRIDPTFGSSREITTKLNKEKKSVPSKDNRKVSKEKKMPSLSSCNPLEQEKPT 228
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 26.2 bits (55), Expect = 7.8
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 108 EKAKLRIGKNGARCALKEMPTLEAEPEQKDDKLIK--ERNKTNSGDNGKIVKEMKSNKNT 281
E A R+G N A+ + T +P Q+DD+L + + NS + K+ ++T
Sbjct: 1291 EDALRRVGTNSVEMAMDWLFTNPEDPVQEDDELAQALALSLGNSSETPKL-------EDT 1343
Query: 282 XXXXXXXERPTEPVEPKWVETDDGQIEIEDPDD 380
+ EP EP E +++ DD
Sbjct: 1344 EKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDD 1376
>At1g24120.1 68414.m03043 DNAJ heat shock protein, putative similar
to Altered Response to Gravity [Arabidopsis thaliana]
GI:4249662; contains Pfam profile PF00226 DnaJ domain
Length = 436
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = +3
Query: 159 EMPTLEAEPEQKDDKLIKERNKTNSGDNGKIVKEMKSNKNTXXXXXXXERPTEPVEPKWV 338
+M + A+ Q D+L+K+RN+ +S + + S+KN + + P
Sbjct: 327 DMTSRYAQEMQSIDELLKQRNEIHSAYTTIPLMKRSSSKNRMRKSSFKKAAAKAPAPTEQ 386
Query: 339 ETDDGQIEIEDPD 377
E ++ + E E+ +
Sbjct: 387 EEEEEEEEEEEEE 399
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,145,679
Number of Sequences: 28952
Number of extensions: 98829
Number of successful extensions: 416
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 557595584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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