Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K09
(333 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.05 |||adaptin |Schizosaccharomyces pombe|chr 1|||Manual 50 9e-08
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 46 2e-06
SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual 45 3e-06
SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 33 0.015
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 31 0.061
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 26 1.3
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 26 1.7
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 1.7
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 3.0
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 4.0
SPAC3H5.10 |rpl3202|rpl32-2, rpl32|60S ribosomal protein L32|Sch... 25 4.0
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 24 5.3
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 24 5.3
SPAC2F7.14c |||exosome subunit Rrp4 |Schizosaccharomyces pombe|c... 24 5.3
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 24 5.3
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 24 5.3
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 24 7.0
SPBC4.03c |||COPII-coated vesicle component Sfb3 |Schizosaccharo... 24 7.0
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 23 9.2
>SPAC1F3.05 |||adaptin |Schizosaccharomyces pombe|chr 1|||Manual
Length = 510
Score = 50.0 bits (114), Expect = 9e-08
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 86 STPVGQKIEQATDGSLPSENWALNMEICDIIN-STADGPKDAIKAIRKRLTMSAGKNYTI 262
S + + I++ATD N ALN+EI D+IN + P++A I KR+ + N T+
Sbjct: 4 SQTLSKYIDKATDQFNLEPNLALNIEIADLINEKKGNTPREAALLILKRVNSA---NPTV 60
Query: 263 VMYTLTVLETCVKNCSRSFH 322
L +L+ CVKNC FH
Sbjct: 61 SYLALHLLDICVKNCGYPFH 80
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 107 IEQATDGSLPSENWALNMEICDIINSTA-DGPKDAIKAIRKRLTMSAGKNYTIVMYTLTV 283
I QATD E W + M+ CD ++ST+ D +++IK + KRL + N I + LT+
Sbjct: 13 ILQATDEKNTKEKWDVIMDACDQLSSTSGDVGRNSIKFLNKRLDTA---NANIQLLALTL 69
Query: 284 LETCVKNCSRS 316
+ VKNC S
Sbjct: 70 TDAIVKNCKTS 80
>SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 44.8 bits (101), Expect = 3e-06
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 107 IEQATDGSLPSENWALNMEICDIINSTADG-PKDAIKAIRKRLTMSAGKNYTIVMYTLTV 283
I+ AT+ + A+N++I D+IN T P++A AI +++ +N T+ L +
Sbjct: 12 IQNATEPYAFEPDLAVNLDIADLINQTGGNLPREAAFAIVRKVN---DRNPTVAYLALNL 68
Query: 284 LETCVKNCSRSFHV 325
L+ CVKNC +F +
Sbjct: 69 LDICVKNCGYAFRL 82
>SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 304
Score = 32.7 bits (71), Expect = 0.015
Identities = 18/77 (23%), Positives = 37/77 (48%)
Frame = +2
Query: 89 TPVGQKIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVM 268
T V I++ T E+ + +++ + +N T GP++A + +RK+L S +
Sbjct: 11 TAVTTYIDRLTSRDTDDEDLSGIVQLSEAVNLTVTGPREASRTLRKKLKYSTPHEQ---V 67
Query: 269 YTLTVLETCVKNCSRSF 319
L +L+ ++N F
Sbjct: 68 RALVILQALIENAGSHF 84
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 30.7 bits (66), Expect = 0.061
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 39 YSISQKCPSLV*GIHFLRQWVKKLNKLQMDRYLRRIGPLIWKYVILLTVPQMAQ 200
Y++ PS++ IH +W +K+N LQ+ L + P Y + +P +++
Sbjct: 129 YAVKAIVPSVLESIHTTGKWNEKMNSLQLLDVLVEVAPSQLSYSLPQIIPVVSE 182
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 1.3
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 14 GIILINIPLFNFAKMSFFGVGNPFSTPVGQKIEQATDGSLPSENWALNMEICDI 175
G + I P NF NPF PV + +++A D P N L C I
Sbjct: 56 GTMFIITPQANFEGGENDPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDLTCPI 109
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 285 STVRVYITIV*FFPALIVSLFLIALMASFGP 193
S R Y + FFP LI+SL + + S GP
Sbjct: 16 SRFRSYSSKFLFFPCLIMSLVFMQWLISIGP 46
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 25.8 bits (54), Expect = 1.7
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = -1
Query: 246 PALIVSLFLIALMASFGPSAVLLIISHISILRAQFSEGNDPSVACSIF*PTGVENGFPTP 67
P ++ L I + A+F P LI H I ++GN F PT + FP
Sbjct: 70 PNVVHLLHEIMIEATF-PDGTYLITIHDPICT---TDGNLEHALYGSFLPTPSQELFPLE 125
Query: 66 KKDIFAKLNNGIFIKIM 16
++ ++A N+ F++++
Sbjct: 126 EEKLYAPENSPGFVEVL 142
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.0 bits (52), Expect = 3.0
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -1
Query: 93 GVENGFPTPKKDIFAKLNNGIFIKIM 16
G+++GFP P+ + NN +I ++
Sbjct: 52 GIQSGFPQPRHGFEEEYNNAEYINML 77
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 24.6 bits (51), Expect = 4.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 127 SICSLFNFLTHWRRKWIPYTKEGHFCEIE*WNIY 26
SI +FN+L+ R K Y G F EI IY
Sbjct: 595 SIKHIFNYLSTLREKGWVYKLRGQFLEIYNETIY 628
>SPAC3H5.10 |rpl3202|rpl32-2, rpl32|60S ribosomal protein
L32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 127
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 187 RRWPKRRHQSNKEKAYYECWKK 252
R P +RHQS++ K E W+K
Sbjct: 10 RTKPFKRHQSDRFKRVGESWRK 31
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 24.2 bits (50), Expect = 5.3
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 23 LINIPLFNFAKMSFFGVGNPFSTPVGQKIEQATDGSLPSENWALNMEICDIINSTA 190
L +PL K+S FSTP + ++ D + EN++L+ + +++ T+
Sbjct: 646 LEKVPLAKHNKLS----DGTFSTPDKENVQSTNDAHIMQENFSLHKAL-EVMRETS 696
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 24.2 bits (50), Expect = 5.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 DAIKAIRKRLTMSAGKNYTIVMYTLTVLETCVKNCSRS 316
+ + I +RL GKN+ V +L++LE C+ N S +
Sbjct: 57 EVMDIIDRRLN-DKGKNWRHVFKSLSLLEYCLHNGSEN 93
>SPAC2F7.14c |||exosome subunit Rrp4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 329
Score = 24.2 bits (50), Expect = 5.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 54 FAKLNNGIFIKIMPVSV 4
+ KL NG+F+K+ P V
Sbjct: 194 YGKLRNGVFLKVPPALV 210
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 83 FSTPVGQKIEQATDGSLPSENWAL 154
F+ P GQ++ Q GSLP++ +++
Sbjct: 216 FAIPSGQRLYQFRRGSLPAQIYSI 239
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 321 WKDLEQFLTHVSSTVRVYITIV*FFPALIVSLF 223
WK+++Q TH+S+ I P L S F
Sbjct: 1535 WKEIQQIWTHLSAIFYESTYIQQLLPELAASFF 1567
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 23.8 bits (49), Expect = 7.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 49 RKNVLLWCRESIFYASGSKN 108
+KN+LL+C+E F S +N
Sbjct: 670 KKNLLLFCKEDEFLYSDQEN 689
>SPBC4.03c |||COPII-coated vesicle component Sfb3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 23.8 bits (49), Expect = 7.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 11 TGIILINIPLFNFAKMSFFGVGNPFSTPVGQK 106
TG + IN+PL A F G F GQK
Sbjct: 751 TGCLPINMPLCVRASRKFIEDGGAFLIVTGQK 782
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 23.4 bits (48), Expect = 9.2
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 130 RSICSLFNFLTHWRRKWIPYTKEGHFCEIE*WNIYQNYARLR 5
+ C L+NF HW+ T+ +C + +Y Y R
Sbjct: 1425 KKACRLWNFKPHWQ----VITRIPQYCHDTHYGVYDAYRDFR 1462
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,550,974
Number of Sequences: 5004
Number of extensions: 32138
Number of successful extensions: 103
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 93942212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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