Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K09
(333 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 67 3e-12
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 67 3e-12
01_06_1193 - 35306608-35306777,35306869-35306890,35306988-353069... 66 9e-12
02_02_0414 + 9972157-9972257,9972925-9973003,9973657-9973755,997... 63 6e-11
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 62 8e-11
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 61 2e-10
10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306 57 4e-09
08_01_0063 + 439640-439740,440067-440145,440586-440684,440767-44... 47 3e-06
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 39 0.001
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086... 38 0.003
04_04_0579 - 26355431-26355684,26355988-26356073,26356292-263563... 31 0.30
11_08_0099 + 28342765-28342872,28343016-28343167,28343461-283437... 28 1.6
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 28 2.1
09_04_0659 + 19282366-19282584,19282668-19282759,19282868-192829... 26 6.4
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 26 6.4
05_04_0186 + 18866762-18866949,18867207-18867345,18868068-188682... 26 6.4
01_06_1020 + 33878391-33878582,33879194-33879271,33879363-338795... 26 6.4
11_01_0318 - 2373511-2375073 26 8.5
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 67.3 bits (157), Expect = 3e-12
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +2
Query: 80 PFSTPVGQKIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYT 259
P P ++++AT L +WA+N+EICD +N+ KD +KA++KRL K+
Sbjct: 10 PARLPASTRVDKATSHLLQGPDWAINLEICDTLNADRWQTKDVVKAVKKRL---QHKDPR 66
Query: 260 IVMYTLTVLETCVKNCSRSFH 322
+ +TLT+LET +KNC H
Sbjct: 67 VQFFTLTLLETMMKNCGEYVH 87
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 67.3 bits (157), Expect = 3e-12
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +2
Query: 98 GQKIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTL 277
G +++AT L +WA NMEICDI N KD +KA++KR+ KN + + L
Sbjct: 3 GSMVDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALKKRI---GHKNPKVQILAL 59
Query: 278 TVLETCVKNCSRSFHV 325
T+LET +KNC FH+
Sbjct: 60 TLLETAIKNCGDIFHM 75
>01_06_1193 -
35306608-35306777,35306869-35306890,35306988-35306996,
35307107-35307115,35307470-35307491,35307981-35308784,
35308861-35309088,35309250-35309335,35309449-35309530,
35309630-35309778,35309992-35310105,35310961-35311059,
35311243-35311321,35311873-35312021
Length = 673
Score = 65.7 bits (153), Expect = 9e-12
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +2
Query: 104 KIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTLTV 283
++E+AT L +WA+N+EICDIIN+ KD +KA++KRL K+ + Y LT+
Sbjct: 21 RVEKATSHLLMGPDWAVNLEICDIINADVWQTKDVVKAVKKRL---QNKDPKVQFYALTL 77
Query: 284 LETCVKNC 307
LET +KNC
Sbjct: 78 LETMMKNC 85
>02_02_0414 +
9972157-9972257,9972925-9973003,9973657-9973755,
9973848-9973913,9974225-9974376,9974503-9974584,
9974696-9974781,9974919-9975098,9975320-9975717,
9976192-9976790,9977141-9977239
Length = 646
Score = 62.9 bits (146), Expect = 6e-11
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +2
Query: 107 IEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTLTVL 286
+++AT+ L +WA+N+EICD +N KD +K+I+KR+ A +N + + LT+L
Sbjct: 6 VDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIKKRI---AHRNAKVQLLALTLL 62
Query: 287 ETCVKNCSRSFHV 325
ET +KNC H+
Sbjct: 63 ETMIKNCGDIVHM 75
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 62.5 bits (145), Expect = 8e-11
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +2
Query: 89 TPVGQKIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVM 268
TP + +E+AT +L +W+ N+EICD+IN+ + I+ I+KR+ + K+ +
Sbjct: 383 TPADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIML---KDARVQY 439
Query: 269 YTLTVLETCVKNCSRSFHVLA 331
+L +LET VKNC ++F +A
Sbjct: 440 LSLVLLETIVKNCEKAFSEVA 460
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +2
Query: 104 KIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTLTV 283
++++AT L +W LN++ICD +NS K+ IKA++KRL KN + + LT+
Sbjct: 7 RVDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKKRL---QHKNSKVQFFALTL 63
Query: 284 LETCVKNCSRSFH 322
LET +KNC H
Sbjct: 64 LETLMKNCGDHVH 76
>10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306
Length = 387
Score = 56.8 bits (131), Expect = 4e-09
Identities = 26/75 (34%), Positives = 48/75 (64%)
Frame = +2
Query: 107 IEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTLTVL 286
+++AT ++ + +WA N+EICD++N+ + I+AI++R+ + KN + L +L
Sbjct: 52 VDEATLETMDAPDWATNLEICDMVNTGNVNSIELIRAIKRRIML---KNPRVQYLALVLL 108
Query: 287 ETCVKNCSRSFHVLA 331
ET VKNC ++F +A
Sbjct: 109 ETVVKNCEKAFSEIA 123
>08_01_0063 +
439640-439740,440067-440145,440586-440684,440767-440880,
441218-441381,442237-442312,442502-442587,442706-442861,
442934-443264
Length = 401
Score = 47.2 bits (107), Expect = 3e-06
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 101 QKIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTLT 280
+ ++ AT L +WA N+EIC+++ KD IK I+K L S KN +Y +
Sbjct: 4 EMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLG-SRSKN--TQLYAVM 60
Query: 281 VLETCVKNCSRSFH 322
+LE + NC H
Sbjct: 61 LLEMLMNNCGEPIH 74
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 38.7 bits (86), Expect = 0.001
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 23/89 (25%)
Frame = +2
Query: 110 EQATDGSLPSENWALNMEICDIIN---------STADG--------------PKDAIKAI 220
E+AT L +WA+N+E+CDIIN +T G KD +K +
Sbjct: 9 ERATSDMLIGPDWAVNIELCDIINMDPGYNLMEATDFGDELVSFVVEVQFRQAKDTLKLL 68
Query: 221 RKRLTMSAGKNYTIVMYTLTVLETCVKNC 307
+KRL KN + + TL VLET KNC
Sbjct: 69 KKRL---GNKNSKVQILTLYVLETLSKNC 94
>06_02_0206 +
13005863-13005966,13006918-13007080,13008534-13008632,
13008704-13008817,13009094-13009254,13009746-13009827,
13009972-13010057,13011563-13011742,13011913-13012424,
13012844-13013478
Length = 711
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 92 PVGQKIEQATDGSLPSENWALNMEICDIINSTADGPKDAIKAIRKRLTMSAGKNYTIVMY 271
P +++AT SL +W+LN+EICDI+N D I + R+ +S I+ Y
Sbjct: 2 PQSVLVDRATSESLIGPDWSLNLEICDILNHDPSLLPDNILQL-YRMVLSLLVYLLILQY 60
Query: 272 TLTVLETCVKNCSR 313
+ + + VK+ +
Sbjct: 61 SRSQAKDVVKSIKK 74
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 173 IINSTADGPKDAIKAIRKRLTMSAGKNYTIVMYTLTVLETCVKNCSRSFHV 325
I+ + KD +K+I+KR+ KN I + LT+LET +KNC H+
Sbjct: 57 ILQYSRSQAKDVVKSIKKRI---GHKNSKIQLLALTLLETLIKNCGDFVHM 104
>04_04_0579 -
26355431-26355684,26355988-26356073,26356292-26356377,
26356596-26356788,26356895-26357094,26359257-26359379
Length = 313
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 8 ETGIILINIPLFN-FAKMSFFGVGNPFSTPVGQKIEQ 115
E G + L+N F +S +GVG P P GQ+IEQ
Sbjct: 51 ELGRCFFLVDLWNHFYPLSAYGVGTPVRLPSGQEIEQ 87
>11_08_0099 +
28342765-28342872,28343016-28343167,28343461-28343705,
28343790-28343921,28344047-28344973,28345057-28345187
Length = 564
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 229 PFPYCFDGVFWAICGTVNNITYFHIKGPILR 137
P P C +G + GT+NN+T+ PIL+
Sbjct: 373 PCPSCINGT--RVVGTINNVTFIMPSTPILQ 401
>02_05_1331 + 35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 93 QWVKKLNKLQMDRYLRRI--GPLIWKYVILLTVPQMAQKTP 209
+W K + L LR + GPL ++ V+LL + + Q+TP
Sbjct: 1959 EWFPKHSSLAFGHLLRLLERGPLDYQRVVLLMLKSLLQQTP 1999
>09_04_0659 +
19282366-19282584,19282668-19282759,19282868-19282958,
19283393-19283512,19283638-19283730,19283795-19283933,
19284060-19284141,19284229-19284361,19285024-19286010
Length = 651
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 61 LLWCRESIFYASGSKN*TSYRWIVTFGELG 150
++W + S F AS S S + IV FG++G
Sbjct: 293 IVWGKSSTFRASPSPGQASLQRIVIFGDMG 322
>09_02_0308 +
7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 307 TVLDACFQHSKGVHYNSVVFSSTHSKPFPYCFD 209
+V+ C H + +H N ++F S H P Y D
Sbjct: 902 SVIGTC--HFRMIHVNVMIFFSAHGVPLTYVTD 932
>05_04_0186 +
18866762-18866949,18867207-18867345,18868068-18868295,
18869023-18869081,18869411-18869482,18870239-18870287,
18870431-18870661,18872018-18872187,18872274-18872478,
18872826-18873494,18873592-18873819,18873901-18874689
Length = 1008
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 44 NFAKMSFFGVG-NPFSTPVGQKIEQATDGSLPSENWAL 154
+F K SF+ G NP VG + ++PSE W++
Sbjct: 581 SFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSI 618
>01_06_1020 +
33878391-33878582,33879194-33879271,33879363-33879524,
33879789-33880106,33880477-33880671
Length = 314
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 38 LFNFAKMSFFGVGNPFSTPVGQKIEQATDGSLPSENWALNMEI-CDIINSTADGPKDAIK 214
+F F K F VG S K+E AT ++ +++ + D+I + P+ +
Sbjct: 193 IFTFYKAQGFPVGA--SLVEDDKLELATSLLAKAKEKGVSLMLPTDVIVADKFAPEANCQ 250
Query: 215 AIRKRLTMSAGKNYTIVM 268
AI K+L +GK T ++
Sbjct: 251 AIAKKLAELSGKGVTTII 268
>11_01_0318 - 2373511-2375073
Length = 520
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 289 FQHSKGVHYNSVVFSSTHSKPFPYCFDGVFWAICGTVNNITY 164
++H KG+HY V P FD F A + + TY
Sbjct: 357 YEHLKGLHYTHAVLHENMRLFPPVQFDSKFCAAADVLPDGTY 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,721,054
Number of Sequences: 37544
Number of extensions: 195652
Number of successful extensions: 577
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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