Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K06
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69716-1|CAA93526.1|  486|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z69716-1|CAA93526.1|  486|Caenorhabditis elegans Hypothetical
           protein C04B4.1 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 37  LKPRHGFDISIRSSCTILYLLFWCIRIEIIKC 132
           +K R    + ++SSC IL   F+C  +E++ C
Sbjct: 140 IKFRENKIVEVKSSCNILSKDFYCPMMELVAC 171


>AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical
           protein Y59C2A.2 protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 167 NVFANEEDAKKSKGKVKHDDP 229
           +VFA+EED +K+   +KH DP
Sbjct: 222 HVFADEEDLEKALATMKHYDP 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,877,652
Number of Sequences: 27780
Number of extensions: 292630
Number of successful extensions: 677
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)