Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K04
(532 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49735| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 30 1.4
SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_9511| Best HMM Match : DUF11 (HMM E-Value=0.097) 28 4.1
SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23) 28 5.4
SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13) 27 7.2
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 27 7.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_52523| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_35776| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.5
SB_226| Best HMM Match : Tektin (HMM E-Value=0) 27 9.5
>SB_49735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 128 CANPQIRQRQHWRGRIPIW 184
CA QI Q++HWR R IW
Sbjct: 17 CARSQIAQKRHWRPRRQIW 35
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -3
Query: 332 LVSGVGHGVGDSIGADVRELPADGESFVL*AYVLQLTTFLVLDTVGSLITILESFHANVV 153
+V G + GD +G +R L D V+ + ++ D +G +IT+L V+
Sbjct: 291 VVQGETYRGGDDMGVVIRVLSDD--MGVVITVLSDDMGVVIRDDMGVVITVLSDDMGVVI 348
Query: 152 VVVSEDLRITIR 117
V+S+D+ + IR
Sbjct: 349 TVLSDDMGVVIR 360
>SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 258 LAVSGQFSYVGPDGVTYSVTYTADEEGFKPSGAHLP 365
+ + QF VGP V Y TY G +PSG+ P
Sbjct: 268 MELDAQFVLVGPRLVRYGSTYPWTYSGTRPSGSTYP 303
>SB_9511| Best HMM Match : DUF11 (HMM E-Value=0.097)
Length = 812
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 171 GFQYGYETSNGIQHQESGQLKNIGSENEALAVSGQFSYVGPDGVTYSVTYTADE 332
G+Q Y NG +Q SG N+ + + ++ + G D TY T T E
Sbjct: 674 GYQLEYSIDNGANYQTSGLFTNLSAGTYKVNINAK---KGTDICTYQRTITISE 724
>SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)
Length = 1592
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 159 IGVEG-FQYGYETSNGIQHQESGQLKNIGSENEALAVSGQFSYVGPDGVTY 308
IG EG + G+ T + H E GQ N+ + ++ALA + F Y G T+
Sbjct: 322 IGTEGIYGEGHVTGYLLYHSEDGQRWNLFTGSDALA-NNSFCYRGKCASTH 371
>SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13)
Length = 446
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -3
Query: 461 LRRCLITTDYIKVRRMSIFGLDVWIL*GDLSDWEVSTAGLESFLVSGVGHGVGDSIGADV 282
LRRCL T D + ++ G ++++ G+L+ A + SF ++ V + A+
Sbjct: 26 LRRCLNTFDLTSLGVGTVVGAGLYVVTGELARDVAGPAVVISFFIAAVAALLSGLCYAEF 85
Query: 281 -RELPADGESFVL*AYVL--QLTTFLV 210
+P G ++V YV +L F+V
Sbjct: 86 GSRIPKAGSAYVY-TYVTLGELLAFIV 111
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -3
Query: 461 LRRCLITTDYIKVRRMSIFGLDVWIL*GDLSDWEVSTAGLESFLVSGVGHGVGDSIGADV 282
LRRCL T D + ++ G ++++ G+L+ A + SF ++ V + A+
Sbjct: 308 LRRCLNTFDLTSLGVGTVVGAGLYVVTGELARDVAGPAVVISFFIAAVAALLSGLCYAEF 367
Query: 281 -RELPADGESFVL*AYVL--QLTTFLV 210
+P G ++V YV +L F+V
Sbjct: 368 GSRIPKAGSAYVY-TYVTLGELLAFIV 393
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 244 QRTKLSPSAGSSLTSAPMESPTP*PTPLTRKDSSPA 351
Q+T +P + S++++P+ +P+P P P S+P+
Sbjct: 454 QKTS-NPISNPSISTSPISNPSPRPHPSPHPSSNPS 488
>SB_52523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Frame = +2
Query: 8 LLITNSLRTKRKQTIKNEIVHCI---------RSVGRRRHCRLPHP*W*CANPQIRQRQH 160
+L+ +L K +K+E +H R++ +R+H + HP ++ R R
Sbjct: 394 ILVLRALMAASKIVVKHEFLHVYAEILDLQSSRAIKKRKHDQSGHPNMGASHSPFRLRNC 453
Query: 161 WRGR 172
W GR
Sbjct: 454 WEGR 457
>SB_35776| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 558
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 259 SPSAGSSLTSAPMESPTP*PTPLTRKDSSPAVLTSQSLKS 378
SP SSL +P++ P P LT +D V S S S
Sbjct: 428 SPRRRSSLVHSPIQHPGPPGAKLTHEDERAQVQHSNSCNS 467
>SB_226| Best HMM Match : Tektin (HMM E-Value=0)
Length = 534
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 279 SYVGPDGVTYSVTYTADEEGFKP 347
+Y+ P G Y TYTA +G +P
Sbjct: 21 AYLRPTGGPYETTYTASFQGIRP 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,971,673
Number of Sequences: 59808
Number of extensions: 253197
Number of successful extensions: 751
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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