Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K01
(483 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31829| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_54230| Best HMM Match : EGF (HMM E-Value=0) 30 0.87
SB_28918| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_13460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_16007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_37509| Best HMM Match : PAE (HMM E-Value=0) 27 6.1
SB_59641| Best HMM Match : PAE (HMM E-Value=0) 27 6.1
SB_45684| Best HMM Match : T-box (HMM E-Value=1.5e-32) 27 6.1
SB_20601| Best HMM Match : F5_F8_type_C (HMM E-Value=9.5e-24) 27 6.1
SB_19486| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_31829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 122 TPFGQVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMT 301
T FG+ KL G ++ R + + G SR W ++ KYV K M PF+ + +
Sbjct: 2 TSFGETKLKNAGDYVVRNASLENMWRGM-SRVWNSYRAKYVTCKNARMTPFWHAVFVAAA 60
Query: 302 FFYMINYGKMK 334
Y I Y +K
Sbjct: 61 LNYAIEYNHLK 71
>SB_54230| Best HMM Match : EGF (HMM E-Value=0)
Length = 1359
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 27 CEKKWLSVITRKNTTLLSTGRMIQPVIMASL 119
CEK W SVI+R+ TTL+ R + V +A+L
Sbjct: 1093 CEKAWTSVISRQ-TTLVRMERPVSTVTVATL 1122
>SB_28918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 272 FFQLLVGSMTFFYMINYGKMKHHRNYKYH*RSNSTIN 382
FF L M FFY+ Y K++HH+ H R + N
Sbjct: 184 FFVLPFALMCFFYLKIYLKIRHHKKQTAHMRRGPSTN 220
>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 298 HAANKQLEEWSHAYFFRLNIFVLPPP 221
H+A K LE W+ + RL+++ PPP
Sbjct: 2285 HSAMKMLELWTQTFLGRLDMYQGPPP 2310
>SB_13460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 212 RAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYMINYGKMKHHRNYKYH*RSNSTIN 382
R + ++H + V + F +L V + ++ + Y +H+R+Y+Y+ + T++
Sbjct: 21 RNYRHYRHTVITVSTVNLLAFVKLSVYVTSPYFPVVYRSNRHYRHYRYYRHTVITVS 77
>SB_16007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 107 YGKPDTPFGQVKLNEIGGW 163
YG+ PFG+ KL +IG W
Sbjct: 164 YGEQKIPFGEQKLEQIGPW 182
>SB_37509| Best HMM Match : PAE (HMM E-Value=0)
Length = 483
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 253 KSRHGSILPTACWQHDFLLYDQLW 324
+SR +L T+C +H LYD W
Sbjct: 418 RSRTSGLLLTSCMEHSQSLYDDTW 441
>SB_59641| Best HMM Match : PAE (HMM E-Value=0)
Length = 1252
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 253 KSRHGSILPTACWQHDFLLYDQLW 324
+SR +L T+C +H LYD W
Sbjct: 1187 RSRTSGLLLTSCMEHSQSLYDDTW 1210
>SB_45684| Best HMM Match : T-box (HMM E-Value=1.5e-32)
Length = 337
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 86 PYDPARYYGKPDTPF-GQVKLNEIGGWLGRRSKTPSAVMGACSRAWW 223
P P R Y PD+PF G+ LN R+S +P+ + +W
Sbjct: 259 PPAPVRLYMHPDSPFTGEQLLNRSS--RSRKSSSPTTTQTTMATIYW 303
>SB_20601| Best HMM Match : F5_F8_type_C (HMM E-Value=9.5e-24)
Length = 405
Score = 27.5 bits (58), Expect = 6.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 161 WLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYMINYGKMK-- 334
+ G TP VM + ++ W R++ QP VG F+ + S + N G +K
Sbjct: 318 YCGEFEVTPRPVMSSSNKLWIRFRSNSSQP-SVG---FYAVYFPSCNAYLTNNSGVIKSP 373
Query: 335 HHRNYKYH 358
+H N YH
Sbjct: 374 NHPNEYYH 381
>SB_19486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 311 MINYGKMKHHRNYKY-H*RSNSTINLFVHENIIIQD 415
++NY K HHR Y + I FV++N+++ D
Sbjct: 10 IVNYPKQSHHRTGGYIREKLQGYIREFVYQNLMLDD 45
>SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 210 LQAPITAEGVLLLRPNHPP 154
L PI GV +LRP+HPP
Sbjct: 51 LDEPIPEIGVPILRPSHPP 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,898,719
Number of Sequences: 59808
Number of extensions: 334771
Number of successful extensions: 880
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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