Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K01
         (483 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g33406.1 68418.m03990 hAT dimerisation domain-containing prot...    29   2.2  
At2g25180.1 68415.m03011 two-component responsive regulator fami...    28   3.8  
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro...    27   5.0  
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F...    27   5.0  
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F...    27   5.0  
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si...    27   6.6  
At2g02835.1 68415.m00229 hypothetical protein                          27   6.6  
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ...    27   8.8  
At5g39400.1 68418.m04773 pollen specific phosphatase, putative /...    27   8.8  
At1g55380.1 68414.m06334 DC1 domain-containing protein contains ...    27   8.8  

>At5g33406.1 68418.m03990 hAT dimerisation domain-containing protein
           low similarity to transposase [Fusarium oxysporum f. sp.
           lycopersici] GI:3126916; contains Pfam profile PF05699:
           hAT family dimerisation domain
          Length = 485

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +2

Query: 35  KMAFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQ---VKLNEI-GGWLG 169
           KMAF    + ++  +H P   A YY  P+  +GQ   +   E+ GG+LG
Sbjct: 123 KMAFEIIDRRWDIQLHRPLHAAGYYLNPEFHYGQPDDIGYEEVLGGFLG 171


>At2g25180.1 68415.m03011 two-component responsive regulator family
           protein / response regulator family protein contains
           Pfam profile: PF00072 response regulator receiver domain
          Length = 596

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 298 HAANKQLEEWSHAYFFRLNIFVLPPPPGSAASAHNS*RSLTPATQPSADFIQF 140
           H  NK+LE WS+A    ++    PPPP   +++ N    ++P      D +++
Sbjct: 426 HQINKRLEHWSNA----VSSSTHPPPPAHNSNSINHQFDVSPLPHSRPDPLEW 474


>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
           protein similar to mavicyanin SP:P80728 from [Cucurbita
           pepo]
          Length = 310

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 229 PPPPGSAASAHNS*RSLTPATQPSADFIQF 140
           PPPP   +  H   R +TP+  P +  + F
Sbjct: 155 PPPPPPPSKTHEPSRRITPSPPPPSKILPF 184


>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 50  DYPKEYNPAVHGPYDPARYYG 112
           DYP EY  AV G YD    YG
Sbjct: 67  DYPNEYITAVGGSYDTVFGYG 87


>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 50  DYPKEYNPAVHGPYDPARYYG 112
           DYP EY  AV G YD    YG
Sbjct: 67  DYPNEYITAVGGSYDTVFGYG 87


>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 365

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +2

Query: 38  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEIGGWLGRRSKTP-SAVMG--AC 208
           MA+  Y   ++P V GP  PA  +  P  P G+   + +  WL      P  AV+G   C
Sbjct: 202 MAYDFYGPGWSP-VTGP--PAALFHDPSNPAGRSGNSGLRKWLDEAKLPPKKAVLGFPYC 258

Query: 209 SRAW 220
             AW
Sbjct: 259 GWAW 262


>At2g02835.1 68415.m00229 hypothetical protein
          Length = 198

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 56  PKEYNPAVHGPYDPARYYGKPDTPF 130
           P+EY  ++  PY P      PD+PF
Sbjct: 121 PEEYEDSLISPYIPEAVLRSPDSPF 145


>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
           autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
           Pfam profile PF00899: ThiF family
          Length = 697

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 280 LEEWSHAYFFRLNIFVLPPP 221
           L++WS  Y+F    FVL PP
Sbjct: 145 LKKWSFRYWFAFPAFVLDPP 164


>At5g39400.1 68418.m04773 pollen specific phosphatase, putative /
           phosphatase and tensin, putative (PTEN1) identical to
           phosphatase and tensin homolog [Arabidopsis thaliana]
           GI:21535746
          Length = 412

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 38  MAFGDYPKEYNPAVHGPYDPARYYGKPDT-PF 130
           M   D+ K YN  +   YDP  +YG+ +  PF
Sbjct: 87  MRHPDHYKVYNLCIEESYDPDNFYGRVERFPF 118


>At1g55380.1 68414.m06334 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 661

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 171 RPNHPPISFSFTC 133
           RP+HPP+S  F+C
Sbjct: 31  RPSHPPLSICFSC 43


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,103,009
Number of Sequences: 28952
Number of extensions: 233618
Number of successful extensions: 671
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)