Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J24
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 30 0.84
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 30 0.84
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 30 0.84
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 30 0.84
AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine re... 28 3.4
Z99278-8|CAE18037.1| 133|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 7.8
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 30.3 bits (65), Expect = 0.84
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +2
Query: 74 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 250
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 251 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 376
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 30.3 bits (65), Expect = 0.84
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +2
Query: 74 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 250
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 251 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 376
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 30.3 bits (65), Expect = 0.84
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +2
Query: 74 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 250
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 251 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 376
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 30.3 bits (65), Expect = 0.84
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +2
Query: 74 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 250
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 251 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 376
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine
receptor, class t protein70 protein.
Length = 323
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 112 Y*VEYYCLALPLPKRFYVLLLT 177
Y V Y+C+ALPL F+VL+ T
Sbjct: 15 YGVAYFCIALPLFPVFFVLMKT 36
>Z99278-8|CAE18037.1| 133|Caenorhabditis elegans Hypothetical
protein Y53C12B.7 protein.
Length = 133
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 IGELSGNVVXEGYNFGYMYHNGIPYPVRPNHFHL-DHPEYLGELEKIKGLRK 502
IG G + + ++ NG+P P+ P H H E +K+K L +
Sbjct: 56 IGSFRGQPIKTRQHHAFIDDNGVPIPLLPYHEHFATSAESSSHHQKLKALAR 107
>Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical
protein F36G9.5 protein.
Length = 327
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 14 NGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHC 148
NG H A I +GS M+ + + W N+ ++ NT +W C
Sbjct: 176 NGFCSHVAYPI--YGSIMLRVTDTMFGWTNNYILMFNTFLWVSIC 218
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 424 IWYTVMIHVSKIVAFVYDVTTKFTDFTKS 338
+W V + + + V Y + TK DFT S
Sbjct: 99 VWLAVSLAILRAVVIKYPINTKIQDFTSS 127
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 14 NGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHCQSASMSYYLHDYSL 190
+G + + V+G +IEY P+ K + + V + + AS+ +YL+D L
Sbjct: 531 SGSNVKATANVQVNGDSLIEYGPADQKSLIGTNVEFSCEVAKEYVRKASVEWYLNDVLL 589
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,969,344
Number of Sequences: 27780
Number of extensions: 242776
Number of successful extensions: 773
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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