Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J22
         (293 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   2.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   4.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   6.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   6.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    19   8.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 122  RRHWGGGVLGNKSNARIAKLEK 187
            R  W G +LG     R+A  +K
Sbjct: 1021 REEWNGDILGYYVGYRLANSDK 1042


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 53  DRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKL 181
           D+  F  ++  +K+  N + + L     GG+   K +  IAK+
Sbjct: 154 DKVNFVTLLGELKSALNAKGKTLSAAVSGGIASCKLSYDIAKV 196


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 161 STCYRGRHRPSVCVTLRN 108
           STC +    PS+   LRN
Sbjct: 312 STCEQANDTPSILHELRN 329


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 161 STCYRGRHRPSVCVTLRN 108
           STC +    PS+   LRN
Sbjct: 312 STCEQANDTPSILHELRN 329


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 VSVLSHAPSPSPA 177
           +S L +APS SPA
Sbjct: 187 ISALVNAPSVSPA 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,064
Number of Sequences: 336
Number of extensions: 817
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5216393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)