Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J21
(465 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-12
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 57 6e-09
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 43 1e-04
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 39 0.002
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.003
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.017
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.022
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.038
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 35 0.038
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.088
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.088
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.15
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 32 0.20
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 31 0.36
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.36
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.36
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.62
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 30 0.82
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.1
SB_24091| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.4
SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 29 2.5
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.5
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 3.3
SB_44122| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023) 27 5.8
SB_58134| Best HMM Match : DAGAT (HMM E-Value=0) 27 7.7
SB_24711| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 27 7.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 69.3 bits (162), Expect = 1e-12
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 226 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVRFPKEQG 402
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 403 LLSSWRGTFANVFGSFRIQAL 465
LS WRG AN F QAL
Sbjct: 69 FLSFWRGNLANCIRYFPTQAL 89
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 343 EDQRYKGIVDAFVRFPKEQGLLSSWRGTFANV 438
E +YKG +D ++ K++G +S +G AN+
Sbjct: 245 EAVKYKGSIDCTIQILKKEGAMSLMKGAGANI 276
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 63.7 bits (148), Expect = 7e-11
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLS 411
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q ++ ++KG++ ++ KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 412 SWRGTFANVFGSFRIQAL 465
++G NV F A+
Sbjct: 90 YFKGNGTNVIRIFPYSAV 107
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 57.2 bits (132), Expect = 6e-09
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 199 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDA 375
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 376 FVRFPKEQGLLSSWR 420
+R + +G+ S WR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 51.6 bits (118), Expect = 3e-07
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +1
Query: 247 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWRGT 426
GG A VS+TA AP++R+K+LLQVQ A GIV F +E G+ S WRG
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 427 FANV 438
ANV
Sbjct: 197 GANV 200
Score = 33.9 bits (74), Expect = 0.067
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWR 420
LAG ++ S+T++ P+E +K L ++ + Y+G++ A +++G+ S +R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 421 GTFANVFG 444
G F ++ G
Sbjct: 288 GLFPSLLG 295
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWR 420
LAG S ++ V P E +K L VQHV+K A YKG+ A +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 213
Query: 421 GTFANVFGSF 450
G + G F
Sbjct: 214 GVTPSFLGLF 223
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 220 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQ 399
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 400 GLLSSWRGTFANVFGSFRIQAL 465
G+ + W+G + F A+
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAV 130
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 196 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAEDQRYKGI 366
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 367 VDAFVRFPKEQGLLSSWRG 423
D F KE+G + ++G
Sbjct: 79 KDCFRTILKEEGAMGLFKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWR 420
L G S ++ V P E +K L VQHV+K A YKG+ A +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAH---YKGMRHALKTILREEGILALYK 482
Query: 421 G 423
G
Sbjct: 483 G 483
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = +1
Query: 214 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA---------EDQRYKGI 366
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 367 VDAFVRFPKEQGLLSSWRGTFANV 438
+ V K +G+ + ++G +
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGI 93
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +1
Query: 229 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLL 408
A++ +AG +S + A P++ +K+ LQ + K E +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 409 SSWRG 423
++G
Sbjct: 80 GLYKG 84
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.5 bits (78), Expect = 0.022
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLS 411
K LAGGI+ + P E VK LQ+ + A Y+G +D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 412 SWRGTFANVFGS 447
+RG + ++GS
Sbjct: 98 LYRGLSSLLYGS 109
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 35.5 bits (78), Expect = 0.022
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 202 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFV 381
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 382 RFPKEQGLLSSWRGTFANVFGSF 450
+ KE+G++ RG + + F
Sbjct: 180 QSYKEEGMIVFTRGIWPTLLRGF 202
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.7 bits (76), Expect = 0.038
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 241 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSW 417
+ G+S+ V +A+A P + VK+ Q + + I YK + AF + K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 418 RG 423
G
Sbjct: 174 TG 175
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 241 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSW 417
LA + A T VA P++ V+ Q + Y+G +D + + +G+L+ +
Sbjct: 215 LASALVAGFVATCVASPVDIVRTRFMTQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALY 273
Query: 418 RGTFAN 435
+G F N
Sbjct: 274 KGFFPN 279
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 34.7 bits (76), Expect = 0.038
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 253 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWRGTFA 432
I A TAV PI+ VK +Q Q + ++ YK +D F + + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 433 NVFG 444
+ G
Sbjct: 980 QLLG 983
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLS 411
K+ +AG + A + P++ +K+ LQ + K E YK D F + + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 412 SWRGTFANVFGS 447
+RG + S
Sbjct: 99 LFRGVTVPILNS 110
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 190 SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIV 369
S K+ DP + AG I+ + + P++RVK +LQ++ + Y G V
Sbjct: 126 SYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPV 180
Query: 370 DAFVRFPKEQGLLSSWRG 423
D R +E G+ ++G
Sbjct: 181 DCLRRIYREAGVRGVYKG 198
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 283 APIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWRG 423
AP ERVK LLQVQ K+ RY+G+ D ++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSW 417
F++G + V+ + P++ V+ L VQ +S + + Y GIV A R E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 418 RG 423
+G
Sbjct: 90 KG 91
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 268 SKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWRG 423
S+ VA ER +L+ Q Q D RY+G +D+F + +G L S+RG
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRG 329
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSW 417
F A IS + A P++ K +Q + I YKG +D R + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 418 RG 423
+G
Sbjct: 154 KG 155
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 355 YKGIVDAFVRFPKEQGLLSSWRG 423
Y + +A R KE+G+L+ WRG
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRG 57
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSS- 414
F+ GG++ AVS+T P++ V+ +Q ++ + + +Y ++ V K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 415 WRGTFAN 435
+RG N
Sbjct: 233 YRGLSIN 239
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 250 GISAAVSKTAVAPIERVKLLLQVQH 324
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 30.7 bits (66), Expect = 0.62
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLS 411
K+F AGG P++ +K+ LQ K E + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 412 SWRGTFANVFGSFRIQAL 465
++G A + G I A+
Sbjct: 87 LYKGMAAPITGVTPIFAI 104
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 30.3 bits (65), Expect = 0.82
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 337 IAEDQRYKGIVDAFVRFPKEQGLLSSWRGTFANVFG 444
I + ++Y G+++AF R +++G+ + +RG + G
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIG 54
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 244 AGGISAAVSKTAVAPIERVKLLLQ 315
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_24091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 289 IERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWRGTFANVFGSF 450
+E VK LL+V+ SKQ + + R E LL+ W +FAN G F
Sbjct: 148 LEAVKQLLEVKDYSKQYQLVEIITKNIFKIFRHSTEWELLAKWSVSFANETGIF 201
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/75 (22%), Positives = 29/75 (38%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSW 417
F +GGI+ +S P++ VK Q + +Y G D + G+ +
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 418 RGTFANVFGSFRIQA 462
+G A + F A
Sbjct: 421 QGLLATILRGFPTNA 435
>SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 492
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +3
Query: 246 WRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPLSQGAGSALILAWY 425
WR ++ LQ HR + A+Q+ R LQG R R +G+ + W
Sbjct: 379 WRERQKELQGKGGRHRGNGEGSAVNAQQEWRERQKELQGKGGRHRGKGEGSAVNVQQEWR 438
Query: 426 LRQ 434
RQ
Sbjct: 439 ERQ 441
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +3
Query: 246 WRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPLSQGAGSALILAWY 425
W+ ++ LQ HR + A+Q+ R LQG R R +G+ + W
Sbjct: 263 WKERQKELQGKGGRHRGNGEGSVVNAQQEWKERQKELQGKGGRHRGNGEGSALNVQQEWR 322
Query: 426 LRQ 434
RQ
Sbjct: 323 ERQ 325
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVRFPKEQGLL 408
K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 409 SSWRGTF 429
+ +G F
Sbjct: 66 AMQKGLF 72
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +1
Query: 244 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRFPKEQGLLSSWRG 423
AG ++ + AV P++ +K LQ+ + + + Y GI+D + +GL + ++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQG---EPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_44122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 246 WR-YLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQ-GYRRRLRPLSQGAGSALILA 419
W+ YL RR R Q+ P+ R Q + RG + YRRRL L + +
Sbjct: 232 WKGYLARRAYKDRQTFIKEQL--PAILRIQANIRGFLQRVKYRRRLAELKSSENDVIKIQ 289
Query: 420 WYLRQCL 440
++R CL
Sbjct: 290 SWMRMCL 296
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 367 VDAFVRFPKEQGLLSSWRG 423
+DA ++ P+ +GL S WRG
Sbjct: 64 IDALIKIPRYEGLSSLWRG 82
>SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023)
Length = 565
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 291 RARQIAAPSPARQQTDRRGPTLQGYRRRLRPLSQGAGSAL 410
R R+ P P + RR P QGY + RP+ + G A+
Sbjct: 435 RDRKRMRPGPQSNEETRR-PGFQGYGKTKRPVLESDGKAM 473
>SB_58134| Best HMM Match : DAGAT (HMM E-Value=0)
Length = 288
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -2
Query: 257 EIPPARKSLANATGSARFDILFDYVVLFGWILADKEGLRH 138
+ P + G+ +F + DY++ FG +KE + H
Sbjct: 135 KFPGITPHILTLAGNMKFPVTRDYMMAFGVCTVEKESIHH 174
>SB_24711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 241 ESLWRTRLDRRDSTFCSIMWSSLGGYLRTRKDFGTHG 131
E+L R + DRR T + GG+++ RK F +G
Sbjct: 96 ENLIRFKSDRRGKTLIQLRNLGKGGWIKPRKLFNENG 132
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 156 QGRTSAHTEWKNHEKRTPD 100
QGRT HT NHEK T +
Sbjct: 675 QGRTGGHTASDNHEKGTKE 693
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 258 RRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPLS 389
RR +D R + +R+ +PSP +++ RR P+ RR R S
Sbjct: 1076 RRTPEDRRRSRGSRR--SPSPPKREPRRRSPSASPPRREARKRS 1117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,632,203
Number of Sequences: 59808
Number of extensions: 332110
Number of successful extensions: 1175
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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