Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J20
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 148 3e-36
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 31 0.75
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 31 0.75
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 31 0.75
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 31 0.75
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 4.0
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 4.0
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 4.0
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 148 bits (358), Expect = 3e-36
Identities = 70/134 (52%), Positives = 90/134 (67%)
Frame = +3
Query: 3 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 182
FSYGLVV+QVYD GT++ P +LD+ E+LR++FL+GV NVA++SL++ YPT+AS HS+A
Sbjct: 183 FSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLA 242
Query: 183 NGFKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXX 362
NG +N+L +AAVT+V FKEA TIK +I DPSKF
Sbjct: 243 NGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPAAAAPAAKKEEP 298
Query: 363 XSESDDDMGFGLFD 404
ESDDDMGFGLFD
Sbjct: 299 KEESDDDMGFGLFD 312
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 369 ESDDDMGFGLFD 404
ESDDDMGFGLFD
Sbjct: 96 ESDDDMGFGLFD 107
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 369 ESDDDMGFGLFD 404
ESDDDMGFGLFD
Sbjct: 100 ESDDDMGFGLFD 111
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 369 ESDDDMGFGLFD 404
ESDDDMGFGLFD
Sbjct: 99 ESDDDMGFGLFD 110
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 369 ESDDDMGFGLFD 404
ESDDDMGFGLFD
Sbjct: 100 ESDDDMGFGLFD 111
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 447 VLMRPHVYYDAHVLSQRDQSPCRRHS 370
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 447 VLMRPHVYYDAHVLSQRDQSPCRRHS 370
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 447 VLMRPHVYYDAHVLSQRDQSPCRRHS 370
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 447 VLMRPHVYYDAHVLSQRDQSPCRRHS 370
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 139 DNESAATLATPARNFSRRSSGLMSRIAGAKMVPES 35
D + L PA + R+ S +MSR AG+K P S
Sbjct: 72 DASKRSGLKAPAASAIRKDSSVMSRSAGSKASPGS 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,061,367
Number of Sequences: 27780
Number of extensions: 191406
Number of successful extensions: 568
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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