Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J18
(617 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24180.1 68417.m03470 pathogenesis-related thaumatin family p... 31 0.81
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 30 1.1
At5g22540.1 68418.m02630 expressed protein contains Pfam profile... 29 1.9
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 29 1.9
At2g45870.1 68415.m05705 expressed protein contains Pfam profile... 29 1.9
At3g62160.1 68416.m06984 transferase family protein low similari... 29 2.5
At4g02810.1 68417.m00381 expressed protein 28 4.3
At3g52970.1 68416.m05839 cytochrome P450 family protein cytochro... 28 4.3
At5g49850.1 68418.m06173 jacalin lectin family protein similar t... 28 5.7
At5g15510.1 68418.m01816 expressed protein 27 7.5
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 27 10.0
At1g17460.1 68414.m02141 myb family transcription factor contain... 27 10.0
>At4g24180.1 68417.m03470 pathogenesis-related thaumatin family
protein similar to SP|P28493 Pathogenesis-related
protein 5 precursor (PR-5) {Arabidopsis thaliana};
contains Pfam profile PF00314: Thaumatin family
Length = 255
Score = 30.7 bits (66), Expect = 0.81
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 180 GIVTSLNRRVPREFRYGTQAVCKT 109
G VT LN++ P E R+G+ + CK+
Sbjct: 165 GCVTDLNQKCPTELRFGSGSACKS 188
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 1648
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 329 ARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQ 472
AR++I T+KR + P+ + +++N L+KL A C Q
Sbjct: 719 AREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQ 766
>At5g22540.1 68418.m02630 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 440
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 253 EAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHDEKAINFV 372
EA LD+ KTFV + + + + K F+D + + FV
Sbjct: 217 EAKHLLDLIRKTFVPVPSQRRIKDHSSKSSFNDHEYLGFV 256
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 29.5 bits (63), Expect = 1.9
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +1
Query: 220 DNYNLHSVKNYEAIRFLDIFEKTFVQSLQK-GKFESYGKKIDFHDEKAINFVGNYWQENA 396
DN LHSV + EA IFE V+ + G +++ ++ + F+ N EN
Sbjct: 33 DNNRLHSVFDAEASL---IFESWMVKHGKVYGSVAEKERRLTIFEDN-LRFINNRNAENL 88
Query: 397 DLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFMPSALDFYQTALRD 543
Y +T S GA P+P H FM S+ D Y+T+ D
Sbjct: 89 S-YRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSS-DRYKTSADD 135
>At2g45870.1 68415.m05705 expressed protein contains Pfam profile
PF05249: Uncharacterised protein family (UPF0187)
Length = 410
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +2
Query: 308 KANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHS 487
K++ + ++ KLIS +K S+ I +R + K+ L N + S S++HL H
Sbjct: 49 KSDDSPLSEKLISLLKAVPNWSDGIKERR-MQQKRSLYTHENWVRHRS----SLRHLRHV 103
Query: 488 TSTPSCPVRLTFTKPHF 538
+S+PS V L+ P F
Sbjct: 104 SSSPSSRVILSLIPPVF 120
>At3g62160.1 68416.m06984 transferase family protein low similarity
to Taxus cuspidata transferases: 10-deacetylbaccatin
III-10-O-acetyl transferase GI:6746554, taxadienol
acetyl transferase GI:6978038,
2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl
transferase GI:11559716; contains Pfam profile PF02458
transferase family
Length = 428
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 177 IVTSLNRRVPREFRYGTQAVCKTLEVITCC 88
I + L R REFR T +C EVI C
Sbjct: 224 IPSDLIERFKREFRASTGEICSAFEVIAAC 253
>At4g02810.1 68417.m00381 expressed protein
Length = 271
Score = 28.3 bits (60), Expect = 4.3
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -2
Query: 592 MRLCNPPSCYIADRMQG 542
+R+C+PP C++++R +G
Sbjct: 146 IRVCSPPRCFVSERREG 162
>At3g52970.1 68416.m05839 cytochrome P450 family protein cytochrome
P450 76A2, eggplant, PIR:S38534
Length = 516
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +1
Query: 331 KKIDFHDEKAINFVGNYWQENADLYE----EEVTKDY 429
+K FH EKA G + +E ++ E +E TKDY
Sbjct: 242 RKTQFHVEKAFEIAGEFIRERTEVREREKSDEKTKDY 278
>At5g49850.1 68418.m06173 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 596
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/59 (20%), Positives = 25/59 (42%)
Frame = +1
Query: 43 KHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRP 219
K +G F ++ + F + G + WY+P+ GY + ++++P P
Sbjct: 386 KTSKGRTSRTFGERTSDSVEFVIESKGCAVVGFHGWYAPLGAGYITALGAHFYPMPLPP 444
>At5g15510.1 68418.m01816 expressed protein
Length = 497
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 334 KIDFHDEKAINFVGNYWQENA---DLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 504
+ D+ + ++F+ Y E L EEE + ++ E+V + A P P+ F+
Sbjct: 397 EFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRK--ELVPK----AQPMPYFDRPFI 450
Query: 505 PSALDFYQTALRDPAFY 555
P + TA RDP F+
Sbjct: 451 PRRSSKHPTAPRDPKFH 467
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 118 NGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFE 282
+GL +IP +W + +TG + + P D V NYE L+ F+
Sbjct: 1004 SGLSNIPIANWDTKFETGTKTALLHPFSPIVVAADENERIRVWNYEEATLLNGFD 1058
>At1g17460.1 68414.m02141 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 604
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 263 GSWTFLKRLSYSPY 304
G WT +K+LS+SPY
Sbjct: 517 GKWTEIKKLSFSPY 530
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,796,102
Number of Sequences: 28952
Number of extensions: 287776
Number of successful extensions: 831
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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