Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J17
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   0.92 
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   0.92 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   8.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.6  

>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 29  PLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLAE 130
           P+ K +E V+       Q +KGIA + +EN   E
Sbjct: 89  PVYKMIEVVHAGNADDIQLVKGIANECIENAKGE 122


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 29  PLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLAE 130
           P+ K +E V+       Q +KGIA + +EN   E
Sbjct: 89  PVYKMIEVVHAGNADDIQLVKGIANECIENAKGE 122


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 121 AIL*IFDRYTFD 86
           A+L IFD YT+D
Sbjct: 493 ALLDIFDTYTYD 504


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 321 FFFFLHKDI 295
           F+FFLHK +
Sbjct: 257 FYFFLHKQV 265


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 321 FFFFLHKDI 295
           F+FFLHK +
Sbjct: 257 FYFFLHKQV 265


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 76  RTENQRYSDQRFREWLSGGIDQPRRIRSRLC*HQTEERKG 195
           RT  +RYS  R RE  S   ++  R        ++ +R+G
Sbjct: 281 RTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRG 320


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 242  NNTVKHKFLLH 210
            NNT+ H F+ H
Sbjct: 1733 NNTLLHSFMYH 1743


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 242  NNTVKHKFLLH 210
            NNT+ H F+ H
Sbjct: 1729 NNTLLHSFMYH 1739


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,695
Number of Sequences: 438
Number of extensions: 1869
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)