Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J16
         (384 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029041-1|AAH29041.1|  668|Homo sapiens ZBTB20 protein protein.       30   2.2  
AF139460-1|AAG28340.2|  741|Homo sapiens BTB/POZ zinc finger pro...    30   2.2  
AK022555-1|BAB14097.1|  523|Homo sapiens protein ( Homo sapiens ...    29   6.8  
BX640673-1|CAE45805.1|  648|Homo sapiens hypothetical protein pr...    28   8.9  

>BC029041-1|AAH29041.1|  668|Homo sapiens ZBTB20 protein protein.
          Length = 668

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 148 ESTHCRKMYRILAILVLVGSAHAQANAND 234
           E+THCRK  R + I  LVG+ H +    D
Sbjct: 234 ETTHCRKQPRPVRIQTLVGNIHIKQEMED 262


>AF139460-1|AAG28340.2|  741|Homo sapiens BTB/POZ zinc finger
           protein DPZF protein.
          Length = 741

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 148 ESTHCRKMYRILAILVLVGSAHAQANAND 234
           E+THCRK  R + I  LVG+ H +    D
Sbjct: 307 ETTHCRKQPRPVRIQTLVGNIHIKQEMED 335


>AK022555-1|BAB14097.1|  523|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12493 fis, clone NT2RM2001635, moderately
           similar to NUCLEAR ENVELOPE PORE MEMBRANE PROTEIN POM
           121. ).
          Length = 523

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 250 INSIFKI--PNQAPTTTKKPTMTVSAPSAVPTVNTN 351
           + SIF+   P   PTTT   T + S P+AVPT  ++
Sbjct: 152 MGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATSS 187


>BX640673-1|CAE45805.1|  648|Homo sapiens hypothetical protein
           protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
 Frame = +1

Query: 145 KESTHCRKMYRILAILVLVGSAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAP 324
           K+ T  ++M  +L +L+  G   A A       E+ + + K+P + P +++ PT  ++ P
Sbjct: 439 KQMTRSQQMDELLDVLIESGEMPADAR------EDHSCLQKVP-KIPRSSRSPTAVLTKP 491

Query: 325 SAVPTVNTNGNRGRYD---TDPD 384
           SA     ++G++  +D   TD D
Sbjct: 492 SASFEQASSGSQIPFDPYATDSD 514


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,084,930
Number of Sequences: 237096
Number of extensions: 881935
Number of successful extensions: 2296
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)