Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J16
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.28
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.28
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 0.64
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 2.0
U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical p... 27 4.5
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p... 27 6.0
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.0
Z92781-2|CAB07181.2| 397|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z68014-3|CAA92025.2| 360|Caenorhabditis elegans Hypothetical pr... 26 7.9
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 26 7.9
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 26 7.9
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 26 7.9
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.1 bits (67), Expect = 0.28
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 235 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNT 348
+ L +++++ + + TTT+KP+ T + PS PT T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTT 612
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.1 bits (67), Expect = 0.28
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 235 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNT 348
+ L +++++ + + TTT+KP+ T + PS PT T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTT 612
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 280 APTTTKKPTMTVSAPSAVPTVNTN 351
APTTT+KPT T + P+ T T+
Sbjct: 442 APTTTQKPTTTTTTPAPTTTSTTS 465
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 384 IGVCIIASSITVGIYSRNS*W-GTNSHGWF 298
IGVC I +SI + S N W GT S W+
Sbjct: 486 IGVCCIVTSILCILISTNWTWKGTGSEAWY 515
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 271 PNQAPTTTKKPTMTVSAPSAVPTVNT 348
P TT KPT T + P+ PT T
Sbjct: 259 PTTTTQTTTKPTTTTTTPTTTPTTTT 284
>U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical
protein T22F7.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 280 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPD 384
AP + P TV P+ P+V + GN G+ PD
Sbjct: 132 APGAPETPGATVPPPTMSPSVTSGGNPGKSLCPPD 166
>Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical
protein C16C10.12 protein.
Length = 610
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 150 FFYEIYFKTKTLNSNITDNTFLAVVSLCFLIIFIFFVG 37
F+ E+ K + N DN L V+ LC ++IF + G
Sbjct: 564 FYRELILKQFSFNK---DNYQLDVIGLCSIVIFFYLAG 598
>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
protein R06F6.8b protein.
Length = 1470
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 226 ANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSA 330
A I E+I++ F+ P + T+ TVS+PSA
Sbjct: 964 ARSIGSEDIDAFFRTPPPSAKTSLSRRPTVSSPSA 998
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 217 QANANDIDLEEINSIFKIPNQA-PTTTKKPTMTVSAPSAVPTVNT 348
Q N I+++E NS Q PTT ++ T++ + + PT T
Sbjct: 1944 QPNREKIEIDEENSSSSNSGQEKPTTKERTTVSTTVSTTTPTEET 1988
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 241 LEEINSIFKIPN-QAPTTTKKPTMTVSAPSAV-PTVNTNGN 357
+ E NSI I + PTT K T+T PS+V P+ N + N
Sbjct: 666 ISEENSIENISKTKTPTTVPKSTITGRMPSSVNPSDNLSNN 706
>Z92781-2|CAB07181.2| 397|Caenorhabditis elegans Hypothetical
protein F09C3.3 protein.
Length = 397
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 RKMYRILAILVLVGSAHAQANANDIDLEEINSIFK 267
RK+ L +L+ + H + N DL+ IN IFK
Sbjct: 129 RKLIEHLLVLLHLPKIHVLSFKNMSDLQSINEIFK 163
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 286 TTTKKPTMTVSAPSAVPTVNT 348
TTT PT T + P+ PT T
Sbjct: 271 TTTTTPTTTTTTPTTTPTTTT 291
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 26.2 bits (55), Expect = 7.9
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +1
Query: 172 YRILAILVLVGSAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNT 348
+ + +L G A N + L + + Q TTTKKP+ T S T T
Sbjct: 343 HALFELLSKTGDDEALQNTFPLPLTTTTEVIR---QVTTTTKKPSTTTSTKKLTTTTTT 398
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 280 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDT 375
APTTT T T +AP VPTV+ R T
Sbjct: 477 APTTTS--TTTTTAPITVPTVSPTTTTTRQTT 506
>Z68014-3|CAA92025.2| 360|Caenorhabditis elegans Hypothetical
protein W04G3.3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 217 QANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNT 348
+ANAN +DL+ I S +IP AP AP +P VNT
Sbjct: 94 EANANRVDLQGITS-GQIPGLAPIPVPGFPGPQDAP-VIPGVNT 135
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 280 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDT 375
APTTT T T +AP VPTV+ R T
Sbjct: 477 APTTTS--TTTTTAPITVPTVSPTTTTTRQTT 506
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 180 YSVHLSTVCRFFYEIYFKTKTLNSNITDNT 91
Y+ S +F YF TK N+N TDNT
Sbjct: 218 YNSDSSEKWKFIKAHYFVTKPTNTNNTDNT 247
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 171 VQNISYPGTGRFCSR 215
V NISYPG RFC +
Sbjct: 172 VDNISYPGLIRFCGK 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,876,399
Number of Sequences: 27780
Number of extensions: 153690
Number of successful extensions: 661
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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