Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J14
(436 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 161 4e-39
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 128 7e-29
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 121 8e-27
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 106 2e-22
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 100 1e-20
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 99 4e-20
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 99 5e-20
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 76 3e-13
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 68 1e-10
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 64 9e-10
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 60 2e-08
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 50 2e-05
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 45 6e-04
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 45 8e-04
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 44 0.001
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 44 0.001
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 43 0.003
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 42 0.004
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 42 0.007
UniRef50_Q7QSF4 Cluster: GLP_426_5093_5482; n=1; Giardia lamblia... 41 0.013
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 41 0.013
UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati... 40 0.017
UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps... 40 0.017
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 38 0.070
UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ... 38 0.092
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 37 0.21
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 37 0.21
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 36 0.28
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 36 0.28
UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639... 36 0.49
UniRef50_Q9ZV33 Cluster: Dof zinc finger protein DOF2.2; n=4; Ar... 36 0.49
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 35 0.86
UniRef50_A7EEV7 Cluster: Predicted protein; n=1; Sclerotinia scl... 34 1.5
UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=... 33 2.0
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 33 3.5
UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 33 3.5
UniRef50_A1CQQ2 Cluster: YdiU domain protein; n=15; Pezizomycoti... 32 6.0
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 32 6.0
UniRef50_A2QS40 Cluster: Remark: ATR1 encodes a Myb-like transcr... 31 8.0
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 161 bits (392), Expect = 4e-39
Identities = 80/109 (73%), Positives = 85/109 (77%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HIFASFNDTFVHVTDLSG+ETI RVTGGMKVKADRDE+SPYAAMLAAQDVA++CK LGIT
Sbjct: 32 HIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGIT 91
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 327
ALHIKLRA AQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 128 bits (308), Expect = 7e-29
Identities = 63/98 (64%), Positives = 71/98 (72%)
Frame = +1
Query: 34 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXX 213
HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RA
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149
Query: 214 XXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 327
Q +KIGRIEDVTP P+DST
Sbjct: 150 NKTKSPGPGGQSALRALSRSGIKIGRIEDVTPTPTDST 187
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 121 bits (291), Expect = 8e-27
Identities = 54/68 (79%), Positives = 61/68 (89%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE+SPYAAM+AAQDV +CK GI
Sbjct: 34 HIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDESSPYAAMMAAQDVVARCKECGIN 93
Query: 181 ALHIKLRA 204
ALH+K+RA
Sbjct: 94 ALHVKMRA 101
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 106 bits (254), Expect = 2e-22
Identities = 53/109 (48%), Positives = 67/109 (61%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI++S+N+T +H TD++G ETIARV+GG + RDE SPYAAM AA +AE K GI
Sbjct: 13 HIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKERGIE 72
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 327
+HIK+RA AQ ++IGRIEDVTPVP D T
Sbjct: 73 NIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 100 bits (240), Expect = 1e-20
Identities = 47/109 (43%), Positives = 67/109 (61%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM AA V E + G T
Sbjct: 79 HIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAKGFT 138
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 327
HI++RA AQ +IGRI+DVTP+P D+T
Sbjct: 139 GFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 99.1 bits (236), Expect = 4e-20
Identities = 50/109 (45%), Positives = 67/109 (61%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM AA VA + K GIT
Sbjct: 50 HVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKEKGIT 109
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 327
++I++RA AQ +++ RIEDVTP+P+D+T
Sbjct: 110 NINIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTPIPTDTT 158
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 98.7 bits (235), Expect = 5e-20
Identities = 48/109 (44%), Positives = 63/109 (57%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA Q V+ CK LGI
Sbjct: 16 HILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCKVLGIN 75
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 327
ALHIK+RA A KIGRIED TP P++ T
Sbjct: 76 ALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTPTPTNGT 124
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 76.2 bits (179), Expect = 3e-13
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEAS 117
HI+AS+NDTFVHVTDLSGRETI RVTGG KVKADRDE+S
Sbjct: 32 HIYASYNDTFVHVTDLSGRETIIRVTGGQKVKADRDESS 70
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +1
Query: 58 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 204
ET+ R TGGMK K D +E+SP AAM AAQDV+++CK L IT LH+KL A
Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHA 98
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 64.5 bits (150), Expect = 9e-10
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +1
Query: 58 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 204
ET+ R TGGMK KAD +E+SP AAM AAQDV+++ K L IT LH+KL A
Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHA 77
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 85 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 204
MK +AD+DE+SP AML AQDV ++CK LGITALHIKL A
Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLA 40
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 73 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 165
V GGMK+KAD DE+SPYAAML +QDVA CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ ++FN+T + ++D+ G G M K R +++PYAA LAA+D K + G+
Sbjct: 23 HVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDHGVK 81
Query: 181 ALHIKLR 201
L ++++
Sbjct: 82 TLEVEVQ 88
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 44.8 bits (101), Expect = 8e-04
Identities = 28/105 (26%), Positives = 49/105 (46%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI A+FN+T V +TD+ G G + K R +++P+AA +AA+ A+ + G+
Sbjct: 20 HIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEHGLK 78
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVP 315
+ + ++ A +++ I DVTPVP
Sbjct: 79 TVEVTVKGPGSGRESAIRALA--------AAGLEVTSIRDVTPVP 115
>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
Victivallis vadensis ATCC BAA-548
Length = 148
Score = 44.4 bits (100), Expect = 0.001
Identities = 30/105 (28%), Positives = 50/105 (47%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
++ A+FN+T V TDL G I TGG +++ YAA + A D A+K + +G+
Sbjct: 41 YVLATFNNTKVTFTDLHGN-VICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLVGMK 99
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVP 315
+ ++++ A M+I I+D+TPVP
Sbjct: 100 EVEVRIKGPGAGRESAVRGIA--------AAGMEISTIKDITPVP 136
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 44.0 bits (99), Expect = 0.001
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI + N+T + +TDL G +G + K R + S YAA AA+ A+K LGI
Sbjct: 155 HIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQLGIK 213
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVP 315
+ +K+R +KI +I+D TP+P
Sbjct: 214 DVTVKIRG--------FGPGRDSSLRGLQIGGLKIYKIQDTTPLP 250
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 42.7 bits (96), Expect = 0.003
Identities = 29/105 (27%), Positives = 46/105 (43%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ASFN+T V +TD G +GG + R +++P+AA +AA+ + G+
Sbjct: 23 HIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDYGLK 81
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVP 315
L + ++ + KI I DVTP+P
Sbjct: 82 NLEVFVKG--------PGPGRESAIRALNAVGYKITNITDVTPIP 118
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 42.3 bits (95), Expect = 0.004
Identities = 28/105 (26%), Positives = 47/105 (44%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ ASFN+T + +TD G +GG K R +++P+AA +A++ GI
Sbjct: 27 HVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQGIK 85
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVP 315
L ++++ + ++I I DVTPVP
Sbjct: 86 NLDVEIKG--------PGPGRESSVRALGALGIRINSIADVTPVP 122
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 41.5 bits (93), Expect = 0.007
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGR-ETIARVTGGMKVKADRDEASPYAAMLA-AQDVAEKCKTLG 174
+IFASF D+F++ TD+ G+ T VT MK + E +P + A DV + K +
Sbjct: 22 YIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ--YAETNPCHRLHAGCLDVTHRFKEMS 79
Query: 175 ITALHIKLR 201
+ ALHI+L+
Sbjct: 80 VPALHIRLQ 88
>UniRef50_Q7QSF4 Cluster: GLP_426_5093_5482; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_5093_5482 - Giardia lamblia ATCC
50803
Length = 129
Score = 40.7 bits (91), Expect = 0.013
Identities = 26/95 (27%), Positives = 43/95 (45%)
Frame = -2
Query: 363 LQPASSSSTLPACGVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVTSSRTELNVQ 184
LQ A++++TL A + R+RG +F L + + + + +L+V
Sbjct: 35 LQTATAATTLVARAICRYRGGVFYTPYLDPTAHKGADGSTAALAIDALARAAVGADLDVH 94
Query: 183 GSYPQGFTFLSNILCSQHSGVG*SLITISLHFHAS 79
G Y L IL H V LIT++LH H++
Sbjct: 95 GGYTAVGNDLDKILGGLHCSVCRWLITVALHLHST 129
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 40.7 bits (91), Expect = 0.013
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ASFN+T V ++D SG + +G + + R + +P+AA AA A + G+
Sbjct: 35 HIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDHGMR 93
Query: 181 ALHIKL 198
+L +++
Sbjct: 94 SLDVRV 99
>UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative;
n=19; Spermatophyta|Rep: Small subunit ribosomal
protein, putative - Oryza sativa subsp. japonica (Rice)
Length = 366
Score = 40.3 bits (90), Expect = 0.017
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ N TFV VTD+ G + G ++ + R S YAA A+ V + +G+
Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307
Query: 181 ALHIKLR 201
++ +K++
Sbjct: 308 SVVMKVK 314
>UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11
- Ostreococcus tauri
Length = 121
Score = 40.3 bits (90), Expect = 0.017
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +1
Query: 4 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITA 183
I + N+TFV++TDL G +G + K + ++S YAA + V + C I
Sbjct: 15 ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFCAQQSIEK 73
Query: 184 LHIKLR 201
L IKLR
Sbjct: 74 LMIKLR 79
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 38.3 bits (85), Expect = 0.070
Identities = 26/105 (24%), Positives = 47/105 (44%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ++FN+T V +TD G G + + R +++P+AA +AA+ A+ G+
Sbjct: 24 HIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAKGSIEHGLK 82
Query: 181 ALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVP 315
L + ++ + +++ I DVTPVP
Sbjct: 83 TLEVTVKG--------PGSGREAAIRALQAAGLEVTAIRDVTPVP 119
>UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29;
Magnoliophyta|Rep: Small subunit ribosomal protein -
Berberis thunbergii (Japanese barberry)
Length = 150
Score = 37.9 bits (84), Expect = 0.092
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ N+TFV VTD G + G ++ S YAA A+ V + LG+
Sbjct: 48 HLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLGMK 107
Query: 181 ALHIKLR 201
++ +K++
Sbjct: 108 SVVMKVK 114
>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined SCAF14706, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/67 (26%), Positives = 38/67 (56%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ A++N+T + VTD +G+ ++ R + G + + +++P AA A A K G+T
Sbjct: 108 HVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKGVT 166
Query: 181 ALHIKLR 201
+ + ++
Sbjct: 167 FVRVVVK 173
>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
pulmonis
Length = 136
Score = 36.7 bits (81), Expect = 0.21
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ++ N+T V +D G +G + K + + + YAA LAAQ+ +EK K GI
Sbjct: 24 HIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEHGIR 82
Query: 181 ALHIKLR 201
+ ++++
Sbjct: 83 EVSVRVK 89
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 36.3 bits (80), Expect = 0.28
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ++FN+T V +TD +G G + K R +++P+AA LA + A+ +
Sbjct: 25 HIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQNMH 83
Query: 181 ALHIKLR 201
++ I ++
Sbjct: 84 SVAISVK 90
>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S11 - Neorickettsia sennetsu (strain Miyayama)
Length = 120
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ +FN+ ++ VTD G +G + K ++ +++ YAA A + K K +G+
Sbjct: 13 HVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLKRIGLK 71
Query: 181 ALHIKL 198
L++ L
Sbjct: 72 ILNVHL 77
>UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1639 - Pyrococcus horikoshii
Length = 102
Score = 35.5 bits (78), Expect = 0.49
Identities = 25/95 (26%), Positives = 39/95 (41%)
Frame = -2
Query: 303 HIFNAANLHAGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFTFLSNILCSQHSG 124
++ N + + S+ L T RS +S NV F S+H
Sbjct: 6 NVLNPSYFKSCPSQGPNCSLCTWPRSFAFASSWGPHPNVNTDNSLFQCFFCCSPSSKHCC 65
Query: 123 VG*SLITISLHFHASGNTGNSFSTGQIGNVHECVI 19
+G LI +S ++H + + F TG I NV+ VI
Sbjct: 66 IGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100
>UniRef50_Q9ZV33 Cluster: Dof zinc finger protein DOF2.2; n=4;
Arabidopsis thaliana|Rep: Dof zinc finger protein DOF2.2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 340
Score = 35.5 bits (78), Expect = 0.49
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -2
Query: 276 AGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFTFLSNIL-CSQHSGVG*SLITI 100
+G S+S+ S +S S+ TS NVQ F FL + +Q G+G +L I
Sbjct: 151 SGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQNLTQLGGIGLNLAAI 210
Query: 99 SLHFHASGNTGNSF 58
+ + +GNT +SF
Sbjct: 211 NGNNGGNGNTSSSF 224
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 34.7 bits (76), Expect = 0.86
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
H+ ASFN+T V VTD+ GR G + R +P+AA AA + G+
Sbjct: 31 HVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTAAGNAIRAVVDQGMQ 89
Query: 181 ALHIKLR 201
++++
Sbjct: 90 RAEVRIK 96
>UniRef50_A7EEV7 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 49
Score = 33.9 bits (74), Expect = 1.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 280 SCWNEREHGEQTGHQVQESLSC 215
+CW+ERE+G +TGH+ S C
Sbjct: 19 TCWDERENGSETGHKASVSKRC 40
>UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2;
Arabidopsis thaliana|Rep: 30S ribosomal protein S11,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 235
Score = 33.5 bits (73), Expect = 2.0
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI N+TFV VTD G +G + + + Y A A+++ + K +G+
Sbjct: 118 HIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMGLK 177
Query: 181 ALHIKL 198
++ +K+
Sbjct: 178 SVVVKV 183
>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S11 - Prototheca wickerhamii
Length = 128
Score = 32.7 bits (71), Expect = 3.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 180
HI ++ N+T + +TDL G G + K R +++ YA+ AA+ +A K G
Sbjct: 21 HIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNEGYR 79
Query: 181 ALHIKLR 201
+ +K++
Sbjct: 80 TIIVKIK 86
>UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11;
n=10; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S11 - Cyanidium caldarium
Length = 129
Score = 32.7 bits (71), Expect = 3.5
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 4 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITA 183
I ++FN+T V TD G+ IA +GG + + +P+AA A + + + G
Sbjct: 23 INSTFNNTIVTATDCYGK-VIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALLEQGTQR 81
Query: 184 LHIKL 198
+HI +
Sbjct: 82 IHISV 86
>UniRef50_A1CQQ2 Cluster: YdiU domain protein; n=15;
Pezizomycotina|Rep: YdiU domain protein - Aspergillus
clavatus
Length = 627
Score = 31.9 bits (69), Expect = 6.0
Identities = 25/66 (37%), Positives = 27/66 (40%)
Frame = -1
Query: 316 TAQGSHLQCGQSSCWNEREHGEQTGHQVQESLSCYLQSHGA*CAGQLSPGFYISQQHPVQ 137
T Q L G CWNERE G Q +L+ Y S AGQL G IS
Sbjct: 97 TPQFQALVSGNKICWNEREGGVYPWAQCYGALTRYSGS----WAGQLGDGRAISLFECTN 152
Query: 136 PT*RRR 119
P RR
Sbjct: 153 PETNRR 158
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 31.9 bits (69), Expect = 6.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 1 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 141
H+ SFN+T V VTD+ GR G K R + +AA +AA
Sbjct: 31 HVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76
>UniRef50_A2QS40 Cluster: Remark: ATR1 encodes a Myb-like
transcription factor that modulates ASA1 expression;
n=5; Trichocomaceae|Rep: Remark: ATR1 encodes a Myb-like
transcription factor that modulates ASA1 expression -
Aspergillus niger
Length = 534
Score = 31.5 bits (68), Expect = 8.0
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = -2
Query: 216 VTSSRTELNVQGSYPQGFTFLSNILCSQHSGVG*SLITISLHFHASGNTGNSFSTGQIGN 37
V S T + S+P G LSN + H G+ SL+T ++++ S G G
Sbjct: 429 VVSLITSWGMDMSFPSGTLILSNSMHHHHQGLAASLVTTTVNYSI------SLGLGFAGT 482
Query: 36 VHECVIEGGE 7
V V +GG+
Sbjct: 483 VESNVNDGGK 492
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,212,526
Number of Sequences: 1657284
Number of extensions: 7271369
Number of successful extensions: 21344
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 20589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21329
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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