Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J13
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 57 1e-08
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 57 1e-08
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 40 0.002
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 31 0.88
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 0.88
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 0.88
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 29 2.7
U23451-2|AAC46746.1| 107|Caenorhabditis elegans Insulin related... 29 2.7
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 4.7
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 4.7
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 28 4.7
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 28 4.7
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 28 6.2
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF016415-4|AAW88419.1| 298|Caenorhabditis elegans Serpentine re... 27 8.2
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +1
Query: 109 PSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAP 288
P C C +RPVCG+D TY+N C L C + +T+ DL GTC D C + P
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTC--CDKKECEKVGTP 72
Query: 289 VCGTDGNTYPNKC---SLEC--SRPLPPSLEMKHRGEC 387
+C G T+ N C +C + + SL H G C
Sbjct: 73 ICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRC 110
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCER----DKTHSDLKIVKEGTCEEADPCV--CTFIYA 285
C + +PVC S G + N C R K H + I E C + C CT
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQ-IHIATEENCISKEACQMPCTDDKH 595
Query: 286 PVCGTDGNTYPNKCSLECSRPLPPSLEMKHRGECQE 393
P+C +D +TY N C + L LE+ +G+C E
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Frame = +1
Query: 121 ACARNLRPVCGSDGKTYHNQCLL-----YCERDKTHSDLKIVK--EGTCEEADPCVCTFI 279
AC + PVC S+G+ N+C L E + T D K+VK +G C + C + +
Sbjct: 871 ACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGD-KLVKDYDGECCRIENCDIS-V 928
Query: 280 YAPVCGTDGNTYPNKCSLE---C--SRPLPPSLEMKHRGEC 387
++PVC T+G T+ N C ++ C + ++++ ++G+C
Sbjct: 929 FSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQC 969
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 115 SCACARNLRPVCGSDGKTYHNQCLLYCE-RDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 291
S C + P+CG++G T+ N C L E + +S +++ G C + + C ++PV
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN---CPSDFSPV 825
Query: 292 CGTDGNTYPNKCSLECSR 345
C + G+T+ N C R
Sbjct: 826 CDSKGSTHQNICHFGVKR 843
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 262 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLPPSLEMKHRGECQEVKVAD-IQPCICNAGD 438
C C + PVCGTD TY N C L C + L + G C + K + + IC+
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKECEKVGTPICDNFG 78
Query: 439 QT 444
+T
Sbjct: 79 ET 80
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 437 IKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPC 544
I+ VCG+D VTY N C L C ++N L + G C
Sbjct: 25 IRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTC 60
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 268 CTFIYAPVCGTDGNTYPNKCSL--ECSRPLPPSLEMKHRGECQEVKV-ADIQPCICNAGD 438
C Y P+CGT+G T+ N CSL E ++E+ + G C + +D P +C++
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCPSDFSP-VCDSKG 830
Query: 439 QT 444
T
Sbjct: 831 ST 832
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 121 ACARNLRPVCGSDGKTYHNQCLLY---CERDKTHSD---LKIVKEGTCEEADPCVCTFIY 282
+C + +PVC S G+T+ + C + C DK H+ L + +G C P CT
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC---CPAGCTDEL 1128
Query: 283 APVCGTDGNTYPNKC 327
+ +C N Y N C
Sbjct: 1129 SVICDQHENIYRNSC 1143
Score = 34.3 bits (75), Expect = 0.071
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQC---LLYCERDKTHS-DLKIVKEGTCEEADPCV--CTFI-Y 282
C + P+C + G+T+ N C C K+ L + G C D C CT +
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKD-CNHNCTNTEF 124
Query: 283 APVCGTDGNTYPNKCSLECSR 345
PVC T+G+ Y N C + R
Sbjct: 125 DPVCDTNGSVYRNLCVFQMRR 145
Score = 34.3 bits (75), Expect = 0.071
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Frame = +1
Query: 145 VCGSDGKTYHNQCLLYCER----DKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNT 312
VC S+G+T+ N C+ R + L IV G C C T PVC + G T
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKT--GQPVCDSRGRT 1087
Query: 313 YPNKCSLECSRPL-------PPSLEMKHRGECQEVKVADIQPCICN 429
+ + C S+ + +L + ++G+C D IC+
Sbjct: 1088 HDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELSVICD 1133
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQC---LLYCERDKTH-SDLKIVKEGTCE-EADPCV-C--TFI 279
C ++ PVC + +T+ N C C+ +K S + I G C C+ C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 280 YAPVCGTDGNTYPNKCS 330
P+C T+P CS
Sbjct: 317 KIPICDNRNMTHPTLCS 333
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLL--NCATQSNPSLSIEHPGPC 544
+CG++GVT+ N C L +N ++ + + G C
Sbjct: 779 LCGTNGVTFTNACSLQKEICESANSTIEVAYTGMC 813
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLL--NCATQ---SNPSLSIEHPGPCDNR 553
VC ++GVT+ N CL+ N Q + ++ + + G C N+
Sbjct: 932 VCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ 972
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPCV----------- 267
C N VCG+DGKTY N+C L K D+ + K G C+EA PC
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 268 --------------CTFIYAPVCGTDGNTYPNKCSL-ECSRPLPPSLEMKHRGEC 387
C + PVC T+G T+ N+C + + S +++KH+G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 422 SATREIKQVCGSDGVTYGNPC-LLNCATQSNPSLSIEHPGPCD 547
S T E K+VCGSDG TY N C L N A + ++ +++ C+
Sbjct: 467 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 121 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVC 294
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 467 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 526
Query: 295 GTDGNTYPNKCSLECSRPLPPSLEMKHRGE 384
G + KC +C PS EM+ E
Sbjct: 527 G-ENEKAECKCPDDC-----PSYEMEEGKE 550
Score = 37.5 bits (83), Expect = 0.008
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 30/129 (23%)
Frame = +1
Query: 139 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 273
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 549 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 606
Query: 274 F-------IYAPVCGTDGNTYPNKCSLE---CSR-----PLPPSLEMKHRGECQEVKVAD 408
+ + A +CG +G YP+ C L+ C + +PPS + + KV
Sbjct: 607 YNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPPSHCHSSKTSFPDFKVR- 665
Query: 409 IQPCICNAG 435
+PC C G
Sbjct: 666 -RPCACYFG 673
Score = 35.5 bits (78), Expect = 0.031
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Frame = +1
Query: 115 SCACARNLRPVCGSDGKTYHNQC---LLYCERDKTHSDLKIVKE--GTCEEADPCVCTFI 279
+C + N P+CGSDG Y+NQC + C + L ++ G D C C +
Sbjct: 685 TCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHVLPLISHWIGESRVLDSCQCNRV 743
Query: 280 --YAPVCGTDG--NTYPNKCSLECSRPLP 354
+ C G P ++C LP
Sbjct: 744 GSFGHTCDETGQCKCRPGVAGIKCDHCLP 772
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 434 EIKQVCGSDGVTYGNPC-LLNCATQSNPSLSIEHPGPCDNRVKV 562
E K+VCG+DGVTY + C + A + + G CD + V
Sbjct: 547 EGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHV 590
Score = 30.7 bits (66), Expect(2) = 0.17
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 145 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 264
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 218
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 428 TREIKQVCGSDGVTYGNPCLLN-CATQSNPSLSIEHPGPCD 547
T VCG+DG TY N C L A + + + G CD
Sbjct: 324 TMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLLN 493
+CGSDG+ Y N C LN
Sbjct: 694 ICGSDGIVYNNQCHLN 709
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 289 VCGTDGNTYPNKCSLE 336
VCG+DG TY N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLL 490
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLL---NCATQSN-PSLSIEHPGPCDNR 553
VCGSD V+Y + C L +C N L + GPC R
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKR 215
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 145 VCGSDGKTYHNQCLL 189
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 437 IKQVCGSDGVTYGNPCLL---NCATQSNPSLSIEHPGPC 544
++ VC ++G T+ N C + +C T+S + ++H G C
Sbjct: 401 MRPVCATNGETFDNECEMKKKSCETKS--MIKVKHQGTC 437
Score = 21.0 bits (42), Expect(2) = 0.17
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 283 APVCGTDGNTYPNKCSL 333
+PVC + G Y + C L
Sbjct: 258 SPVCSSHGVDYQSSCHL 274
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPCV----------- 267
C N VCG+DGKTY N+C L K D+ + K G C+EA PC
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 268 --------------CTFIYAPVCGTDGNTYPNKCSL-ECSRPLPPSLEMKHRGEC 387
C + PVC T+G T+ N+C + + S +++KH+G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 422 SATREIKQVCGSDGVTYGNPC-LLNCATQSNPSLSIEHPGPCD 547
S T E K+VCGSDG TY N C L N A + ++ +++ C+
Sbjct: 475 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 25/122 (20%)
Frame = +1
Query: 139 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 273
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 557 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 614
Query: 274 F-------IYAPVCGTDGNTYPNKCSLE---CSRPLPPSLEMKHRGECQEVKVADIQPCI 423
+ + A +CG +G YP+ C L+ C + P S EM C K + C
Sbjct: 615 YNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPIS-EMP-PSHCHSSKTSFPDSCQ 672
Query: 424 CN 429
CN
Sbjct: 673 CN 674
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 121 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVC 294
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 475 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 534
Query: 295 GTDGNTYPNKCSLECSRPLPPSLEMKHRGE 384
G + KC +C PS EM+ E
Sbjct: 535 G-ENEKAECKCPDDC-----PSYEMEEGKE 558
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 145 VCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEE 252
VCGSDG TY N C L K D+ V G C++
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICDD 854
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 434 EIKQVCGSDGVTYGNPC-LLNCATQSNPSLSIEHPGPCDNRVKV 562
E K+VCG+DGVTY + C + A + + G CD + V
Sbjct: 555 EGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHV 598
Score = 30.7 bits (66), Expect(2) = 0.17
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 145 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 264
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 226
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 428 TREIKQVCGSDGVTYGNPCLLN-CATQSNPSLSIEHPGPCD 547
T VCG+DG TY N C L A + + + G CD
Sbjct: 332 TMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 289 VCGTDGNTYPNKCSLE 336
VCG+DG TY N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLL 490
VCGSDG TY N C L
Sbjct: 819 VCGSDGTTYSNLCEL 833
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 446 VCGSDGVTYGNPCLL---NCATQSN-PSLSIEHPGPCDNR 553
VCGSD V+Y + C L +C N L + GPC R
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKR 223
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 437 IKQVCGSDGVTYGNPCLL---NCATQSNPSLSIEHPGPC 544
++ VC ++G T+ N C + +C T+S + ++H G C
Sbjct: 409 MRPVCATNGETFDNECEMKKKSCETKS--MIKVKHQGTC 445
Score = 21.0 bits (42), Expect(2) = 0.17
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 283 APVCGTDGNTYPNKCSL 333
+PVC + G Y + C L
Sbjct: 266 SPVCSSHGVDYQSSCHL 282
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 112 SSCACARNLRPVCGSDGK---TYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIY 282
S+C+C + PVC +G TY N+C+ C ++ DL ++ EG+C A C
Sbjct: 23 STCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQE-NKKDLVLLYEGSCCSAR--YCNMFE 79
Query: 283 APVCGTDGNTYPNKCSLECSRPLPPSLEMKHRG-ECQEVKVADIQPC 420
PVC ++G Y C E + + L H + + K + PC
Sbjct: 80 QPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPC 125
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLY---C-ERDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 291
C PVC G+T+ N C C +++ + L++ G C E D C V
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE-DMCSAGQTSLTV 183
Query: 292 CGTDGNTYPNKCSLECSRPLPPSLEMKHRGECQEVKVADIQPC 420
C ++GNT+ + CS ++ +M+ + +++A + PC
Sbjct: 184 CDSEGNTHTDICSFYIAK----CRQMRRGIGKKRLQIAGVGPC 222
Score = 33.9 bits (74), Expect = 0.094
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 247 EEADPCVCTFIYAPVCGTDGN---TYPNKCSLECSRPLPPSLEMKHRGECQEVKVADI-- 411
E C C PVC +G TY NKC +C++ L + + G C + ++
Sbjct: 20 EPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSARYCNMFE 79
Query: 412 QPCICNAG 435
QP +C+ G
Sbjct: 80 QP-VCSEG 86
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 413 SHVSATREIKQVCGSDG---VTYGNPCLLNCATQSNPSLSIEHPGPC 544
S S EI VC +G TY N C+ CA ++ L + + G C
Sbjct: 23 STCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSC 69
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 127 ARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDG 306
AR++ CG GK + QC+L + + + + ++G CE+ C I CG +
Sbjct: 89 ARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCEKVLETFC--IGHADCGPNM 146
Query: 307 NTYPNKCSLECSRPL--PPSLEMKHRGEC 387
NKC L+ PL E+ H G+C
Sbjct: 147 LCQQNKCQLKPQEPLCNCQPHEICHHGQC 175
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 SSCACAR-NLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 249
S C+C +L PVC +DG Y + C C ++ +CE
Sbjct: 526 SQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 303
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 948 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1002
Query: 304 GNTYPNKCSLECSRPLPPSLEMKHRGEC 387
GN Y +C R P ++ + EC
Sbjct: 1003 GNIYTCQCGRNEKR--HPITDICLKNEC 1028
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 303
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 304 GNTYPNKCSLECSRPLPPSLEMKHRGEC 387
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 303
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 948 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1002
Query: 304 GNTYPNKCSLECSRPLPPSLEMKHRGEC 387
GN Y +C R P ++ + EC
Sbjct: 1003 GNIYTCQCGRNEKR--HPITDICLKNEC 1028
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 303
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 304 GNTYPNKCSLECSRPLPPSLEMKHRGEC 387
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 303
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 304 GNTYPNKCSLECSRPLPPSLEMKHRGEC 387
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 452 GSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQPESNTVIV 598
GS+G Y PC + PS + GP R V E E TVI+
Sbjct: 310 GSEGNWYSGPCFIEFIDVLLPSYKRDFNGPV--RCTVAEKYSEMGTVII 356
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 175 NQCLLYCERDKTHSDLKIVKEGTCEEADPCVCT 273
N +LY R K HS++ I G C++ PC+CT
Sbjct: 450 NLAVLYKIR-KEHSEIIIHNLGHCDKHLPCICT 481
>U23451-2|AAC46746.1| 107|Caenorhabditis elegans Insulin related
protein 3 protein.
Length = 107
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -2
Query: 598 DNNRIGFRLIFHNLHSVVARTRVFDAQARVRLCG 497
D++ IGF HN+HS++AR+R D +V++CG
Sbjct: 37 DDSEIGF----HNIHSLMARSRRGD---KVKICG 63
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 87 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSL 263
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 566 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNL 619
Query: 264 RL 269
L
Sbjct: 620 PL 621
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 87 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSL 263
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 788 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNL 841
Query: 264 RL 269
L
Sbjct: 842 PL 843
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 130 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 252
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 380 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 424
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 130 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 252
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 377 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 421
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.9 bits (59), Expect = 6.2
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = +1
Query: 253 ADPCVCTFIYAPVCGTDGNTYPN--KCSLECSRPLPPSLEMKHRGECQEVKVADIQPCIC 426
A P F Y PV G DG + + + S P P + + RG+ QE D +
Sbjct: 1405 AGPLWSDFDYTPVIGEDGEEVMDGETQTQDGSEPGDPEFD-EQRGQEQEEGEDDKE---- 1459
Query: 427 NAGDQT--GLR*RRRHLRQPVPVELRHTVEPELEHRTPGSLRQQSEGCGKST*IQ 585
A DQT G RR+ +R+ + + +E TP S++Q S+ + +Q
Sbjct: 1460 RAHDQTAIGRSSRRKKIRKSQCISSENLLE------TPSSVQQSSDSLASESAVQ 1508
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 425 ATREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQPE 580
+T EI++ CG D V + ++ A N S +E P P + + N+ E
Sbjct: 1173 STSEIEKRCGFDAVLHVFSIHMHWANLFNASCILESPEPTKDSTSIDVNEVE 1224
>AF016415-4|AAW88419.1| 298|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 31 protein.
Length = 298
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 558 FTLLSQGPGCSMLKLGFDCVAQFNRHGLP 472
FT++ + GC++ + C+ +F +HG P
Sbjct: 255 FTVVMKVTGCAIESIVVSCLLKFGKHGKP 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,153,182
Number of Sequences: 27780
Number of extensions: 339167
Number of successful extensions: 1211
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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