Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J13
         (620 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77270.1 68414.m08999 expressed protein                             31   0.47 
At5g40942.1 68418.m04973 ribonucleoside-diphosphate reductase sm...    31   0.81 
At3g14850.2 68416.m01876 expressed protein                             30   1.1  
At3g14850.1 68416.m01877 expressed protein                             30   1.1  
At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type f...    29   3.3  
At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type f...    29   3.3  
At2g20595.1 68415.m02409 expressed protein                             28   5.7  
At5g44120.3 68418.m05400 12S seed storage protein (CRA1) nearly ...    27   7.6  

>At1g77270.1 68414.m08999 expressed protein
          Length = 682

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +3

Query: 57  TRYISDRRCANIRRNSAAVVMRVRKKLKTGL-RIRRQDLPQPVPLVLREGQDAQRFENRE 233
           TRY+ D +  N R + +  + R  K+LKT + R     + +  P+V  + +D QR +NRE
Sbjct: 390 TRYVRDSQEKNTRNDESQTIFRASKRLKTEIGRADHNSISKTNPVV--KTKDIQR-KNRE 446


>At5g40942.1 68418.m04973 ribonucleoside-diphosphate reductase small
           chain, putative / ribonucleotide reductase, putative
           similar to ribonucleotide reductase R2 [Nicotiana
           tabacum] GI:1044912; contains Pfam profile PF00268:
           Ribonucleotide reductase, small chain
          Length = 231

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -2

Query: 583 GFRLIFHNLHS-VVARTRVFDAQARVRLCGAIQQARVAVSDAVATA 449
           GF++   N+HS ++ RT+  + + +  +C A++  R  V DA++ A
Sbjct: 101 GFQIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCA 146


>At3g14850.2 68416.m01876 expressed protein
          Length = 321

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +2

Query: 461 GVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQ--PESNTVIVVDYTM 613
           GV +G P   +C  Q  P L  ++PG     V V++      S  V ++D TM
Sbjct: 223 GVLWGEPAAKSCVGQKEPLLGTKYPGGLPAEVGVLKRALGKISKPVTLLDITM 275


>At3g14850.1 68416.m01877 expressed protein
          Length = 253

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +2

Query: 461 GVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQ--PESNTVIVVDYTM 613
           GV +G P   +C  Q  P L  ++PG     V V++      S  V ++D TM
Sbjct: 155 GVLWGEPAAKSCVGQKEPLLGTKYPGGLPAEVGVLKRALGKISKPVTLLDITM 207


>At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type
           family protein contains Pfam domain PF00050: Kazal-type
           serine protease inhibitor domain
          Length = 144

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 109 PSSCA--CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 249
           P+SC   C R   PVCG D  TY   C      D     +++VK+G C+
Sbjct: 68  PASCPVQCFRP-DPVCGEDSVTYWCGC-----ADALCHGVRVVKQGACD 110


>At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type
           family protein contains Pfam domain PF00050: Kazal-type
           serine protease inhibitor domain
          Length = 117

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 142 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 249
           PVCG+DG TY   C      D      ++VK+G C+
Sbjct: 53  PVCGTDGVTYWCGC-----PDAACHGARVVKKGACD 83


>At2g20595.1 68415.m02409 expressed protein
          Length = 69

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 247 EEADPCVCTFIYAPVCGTD-GNTYPNKCSLECSRPLPP 357
           EE+   +C    +  C +D G+ Y N C +EC  P PP
Sbjct: 24  EESGGTICFRQCSQPCRSDDGSCYEN-CKIECGGPKPP 60


>At5g44120.3 68418.m05400 12S seed storage protein (CRA1) nearly
           identical to SP|P15455 [Plant Mol Biol 11:805-820
           (1988)]; contains Pfam profile PF00190 Cupin and Prosite
           11-S plant seed storage proteins signature PS00305
          Length = 472

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 280 YAPVCGTDGNTYPNKCSLECSRPLPPSLEMKHRGECQEVKVAD 408
           YA   G  G  +PN+C L+    L PS  +K   E   ++V D
Sbjct: 21  YAAQQGQQGQQFPNECQLDQLNALEPSHVLK--SEAGRIEVWD 61


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,169,314
Number of Sequences: 28952
Number of extensions: 306942
Number of successful extensions: 918
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)