Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J10
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.0  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 228  YKKTNTETLYPFVEITFHTKEGAHYHIPL 314
            Y+  N++  Y F  + F  +EG  +H+ +
Sbjct: 1035 YRLANSDKPYLFETVEFGREEGKEHHLKI 1063



 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +3

Query: 60   GIPAVGLFVELYKKKDTSWTLWHNTVTSG 146
            G P +   +E  KK  T W    N V  G
Sbjct: 1518 GCPMLYFVIEHKKKTSTEWIQVSNNVKLG 1546


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 300 YHIPLLLSPYGYS 338
           YH  +LLSP GYS
Sbjct: 118 YHPQVLLSPGGYS 130


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 113 MDPVAQHRDVWRW 151
           ++P  QH D W W
Sbjct: 619 INPHQQHLDAWYW 631


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 120 GSMKYLSSYKVQRITPLQGSLLIYLERASIELAWTCL 10
           GS+  L S  V     + G+ LI +   SI    TCL
Sbjct: 222 GSLSQLLSETVALFNDVFGTCLILITGKSIVQLLTCL 258


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 120 GSMKYLSSYKVQRITPLQGSLLIYLERASIELAWTCL 10
           GS+  L S  V     + G+ LI +   SI    TCL
Sbjct: 222 GSLSQLLSETVALFNDVFGTCLILITGKSIVQLLTCL 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,129
Number of Sequences: 336
Number of extensions: 2855
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)