Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J10
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   4.2  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   5.6  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   5.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   9.8  

>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 371 IKLECLFVMSILFLLNRY*CIYNTYTK 451
           + + CLF + +LF L    C++  Y +
Sbjct: 645 LDIACLFALIVLFRLGALLCLWLRYAR 671


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 90  LYKKKDTSWTLWHNTVTSGDGRIQFPFSKDSMAEGVYKLKFNVSDYYKKTN 242
           L +  D   ++W+N        I F   +D +AE +   K  +SDY+ + N
Sbjct: 255 LRESLDLFKSIWNNRWLRTISVILFLNKQDLLAEKIKAGKSKLSDYFGEFN 305


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 135 VTSGDGRIQFPFSKDSMAEGVYKLKFN 215
           + +G GRI  P  K   A   YK+K N
Sbjct: 168 IVAGGGRIDKPILKAGRAYHKYKVKRN 194


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 124 GTTP*RLAMVEYNSLFLRTRWLKE 195
           GTTP   A+V   ++    RWL+E
Sbjct: 682 GTTPAAAAVVAEEAVSAVDRWLRE 705


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,430
Number of Sequences: 2352
Number of extensions: 11673
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)