Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J10
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59498-1|CAA42087.1| 147|Homo sapiens transthyretin protein. 61 2e-09
U19780-1|AAA73473.1| 147|Homo sapiens transthyretin precursor p... 61 2e-09
M11844-1|AAA60013.1| 147|Homo sapiens protein ( Human prealbumi... 61 2e-09
M11518-1|AAA98771.1| 147|Homo sapiens prealbumin protein. 61 2e-09
M10605-1|AAA60012.1| 147|Homo sapiens prealbumin protein. 61 2e-09
K02091-1|AAA60011.1| 147|Homo sapiens TTR protein. 61 2e-09
CR456908-1|CAG33189.1| 147|Homo sapiens TTR protein. 61 2e-09
BT007189-1|AAP35853.1| 147|Homo sapiens transthyretin (prealbum... 61 2e-09
BC020791-1|AAH20791.1| 147|Homo sapiens transthyretin (prealbum... 61 2e-09
BC005310-1|AAH05310.1| 147|Homo sapiens transthyretin (prealbum... 61 2e-09
AF162690-1|AAD45014.1| 147|Homo sapiens transthyretin precursor... 61 2e-09
M11714-1|AAA61181.1| 117|Homo sapiens transthyretin protein. 61 2e-09
M15517-1|AAA60018.1| 147|Homo sapiens prealbumin protein. 60 4e-09
D00096-1|BAA00059.1| 147|Homo sapiens prealbumin protein. 60 4e-09
BC054492-1|AAH54492.1| 997|Homo sapiens RABGAP1 protein protein. 31 1.6
AL365338-3|CAH70298.1| 997|Homo sapiens RAB GTPase activating p... 31 1.6
AK131449-1|BAD18594.1| 599|Homo sapiens d) (GAPCENA). protein. 31 1.6
AJ011679-1|CAB40267.2| 997|Homo sapiens Rab6 GTPase activating ... 31 1.6
AF161357-1|AAF28917.1| 308|Homo sapiens HSPC094 protein. 31 1.6
BC011524-1|AAH11524.1| 356|Homo sapiens family with sequence si... 29 6.5
AL512750-1|CAC21673.1| 118|Homo sapiens hypothetical protein pr... 29 6.5
AK001989-1|BAA92023.1| 356|Homo sapiens protein ( Homo sapiens ... 29 6.5
>X59498-1|CAA42087.1| 147|Homo sapiens transthyretin protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>U19780-1|AAA73473.1| 147|Homo sapiens transthyretin precursor
protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>M11844-1|AAA60013.1| 147|Homo sapiens protein ( Human prealbumin
gene, complete cds. ).
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>M11518-1|AAA98771.1| 147|Homo sapiens prealbumin protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVPGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>M10605-1|AAA60012.1| 147|Homo sapiens prealbumin protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>K02091-1|AAA60011.1| 147|Homo sapiens TTR protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>CR456908-1|CAG33189.1| 147|Homo sapiens TTR protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>BT007189-1|AAP35853.1| 147|Homo sapiens transthyretin (prealbumin,
amyloidosis type I) protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>BC020791-1|AAH20791.1| 147|Homo sapiens transthyretin (prealbumin,
amyloidosis type I) protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>BC005310-1|AAH05310.1| 147|Homo sapiens transthyretin (prealbumin,
amyloidosis type I) protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>AF162690-1|AAD45014.1| 147|Homo sapiens transthyretin precursor
protein.
Length = 147
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + V +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>M11714-1|AAA61181.1| 117|Homo sapiens transthyretin protein.
Length = 117
Score = 60.9 bits (141), Expect = 2e-09
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +3
Query: 30 LSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEGVYKL 206
L VLD G PA+ + V +++K D +W + + TS G + +++ EG+YK+
Sbjct: 2 LMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKV 61
Query: 207 KFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 62 EIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 108
>M15517-1|AAA60018.1| 147|Homo sapiens prealbumin protein.
Length = 147
Score = 60.1 bits (139), Expect = 4e-09
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + + +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAMHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>D00096-1|BAA00059.1| 147|Homo sapiens prealbumin protein.
Length = 147
Score = 60.1 bits (139), Expect = 4e-09
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SRPVLSTHVLDISTGIPAVGLFVELYKKK-DTSWTLWHNTVTSGDGRIQFPFSKDSMAEG 194
S+ L VLD G PA+ + + +++K D +W + + TS G + +++ EG
Sbjct: 28 SKCPLMVKVLDAVRGSPAINVAMHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEG 87
Query: 195 VYKLKFNVSDYYKKTNTETLYPFVEITFHTKEGA--HYHIPLLLSPYGYST 341
+YK++ + Y+K + E+ F + Y I LLSPY YST
Sbjct: 88 IYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
>BC054492-1|AAH54492.1| 997|Homo sapiens RABGAP1 protein protein.
Length = 997
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 VTSGDGRIQFPFSKDSMAEGVY-KLKFNVSDYYKKTNTETLYPFV 266
V S + R+ +PFSK S E + KLK + +K NT+TLY V
Sbjct: 360 VCSPNERLFWPFSKRSTTENFFLKLK-QIKQRERKNNTDTLYEVV 403
>AL365338-3|CAH70298.1| 997|Homo sapiens RAB GTPase activating
protein 1 protein.
Length = 997
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 VTSGDGRIQFPFSKDSMAEGVY-KLKFNVSDYYKKTNTETLYPFV 266
V S + R+ +PFSK S E + KLK + +K NT+TLY V
Sbjct: 360 VCSPNERLFWPFSKRSTTENFFLKLK-QIKQRERKNNTDTLYEVV 403
>AK131449-1|BAD18594.1| 599|Homo sapiens d) (GAPCENA). protein.
Length = 599
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 VTSGDGRIQFPFSKDSMAEGVY-KLKFNVSDYYKKTNTETLYPFV 266
V S + R+ +PFSK S E + KLK + +K NT+TLY V
Sbjct: 364 VCSPNERLFWPFSKRSTTENFFLKLK-QIKQRERKNNTDTLYEVV 407
>AJ011679-1|CAB40267.2| 997|Homo sapiens Rab6 GTPase activating
protein, GAPCenA protein.
Length = 997
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 VTSGDGRIQFPFSKDSMAEGVY-KLKFNVSDYYKKTNTETLYPFV 266
V S + R+ +PFSK S E + KLK + +K NT+TLY V
Sbjct: 360 VCSPNERLFWPFSKRSTTENFFLKLK-QIKQRERKNNTDTLYEVV 403
>AF161357-1|AAF28917.1| 308|Homo sapiens HSPC094 protein.
Length = 308
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 VTSGDGRIQFPFSKDSMAEGVY-KLKFNVSDYYKKTNTETLYPFV 266
V S + R+ +PFSK S E + KLK + +K NT+TLY V
Sbjct: 261 VCSPNERLFWPFSKRSTTENFFLKLK-QIKQRERKNNTDTLYEVV 304
>BC011524-1|AAH11524.1| 356|Homo sapiens family with sequence
similarity 105, member A protein.
Length = 356
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 195 VYKL-KFNVSDYYKKTNTETLYPFVEITFHTKEGAHYHIPL 314
V++L KFN D+ E L + EI+ T+ HYHIP+
Sbjct: 315 VFRLFKFNSRDFEVCYPEEPLRDWPEISLLTENDRHYHIPV 355
>AL512750-1|CAC21673.1| 118|Homo sapiens hypothetical protein
protein.
Length = 118
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 195 VYKL-KFNVSDYYKKTNTETLYPFVEITFHTKEGAHYHIPL 314
V++L KFN D+ E L + EI+ T+ HYHIP+
Sbjct: 77 VFRLFKFNSRDFEVCYPEEPLRDWPEISLLTENDRHYHIPV 117
>AK001989-1|BAA92023.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ11127 fis, clone PLACE1006225. ).
Length = 356
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 195 VYKL-KFNVSDYYKKTNTETLYPFVEITFHTKEGAHYHIPL 314
V++L KFN D+ E L + EI+ T+ HYHIP+
Sbjct: 315 VFRLFKFNSRDFEVCYPEEPLRDWPEISLLTENDRHYHIPV 355
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,628,155
Number of Sequences: 237096
Number of extensions: 1550621
Number of successful extensions: 6327
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6299
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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