Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J10
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77134-7|CAJ90503.1| 121|Caenorhabditis elegans Hypothetical pr... 102 1e-22
Z77134-6|CAB00872.2| 135|Caenorhabditis elegans Hypothetical pr... 102 1e-22
AF039042-10|AAC48252.2| 136|Caenorhabditis elegans Hypothetical... 96 1e-20
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 29 1.8
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 27 5.5
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 7.3
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 7.3
>Z77134-7|CAJ90503.1| 121|Caenorhabditis elegans Hypothetical
protein R09H10.3b protein.
Length = 121
Score = 102 bits (245), Expect = 1e-22
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 30 LSTHVLDISTGIPAVGLFVELYKKKDTSWTLWHNTVTSGDGRIQFPFSKDSMAEGVYKLK 209
+S HVLDIS G PA G+ + Y +++ WT + T +GR+ + ++ G Y+L
Sbjct: 13 ISAHVLDISGGSPAGGVQILAYIQQNDDWTKIGSEFTQDNGRVDWVSPDFTLIPGTYRLV 72
Query: 210 FNVSDYYKKTNTETLYPFVEITFHTKEGA-HYHIPLLLSPYGYSTYRGS 353
+ YYK N E+ YP+VE+ F+ ++ HYH+PL LSP+GYSTYRGS
Sbjct: 73 YITEPYYKAKNVESFYPYVEVVFNIRDATQHYHVPLTLSPWGYSTYRGS 121
>Z77134-6|CAB00872.2| 135|Caenorhabditis elegans Hypothetical
protein R09H10.3a protein.
Length = 135
Score = 102 bits (245), Expect = 1e-22
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 30 LSTHVLDISTGIPAVGLFVELYKKKDTSWTLWHNTVTSGDGRIQFPFSKDSMAEGVYKLK 209
+S HVLDIS G PA G+ + Y +++ WT + T +GR+ + ++ G Y+L
Sbjct: 27 ISAHVLDISGGSPAGGVQILAYIQQNDDWTKIGSEFTQDNGRVDWVSPDFTLIPGTYRLV 86
Query: 210 FNVSDYYKKTNTETLYPFVEITFHTKEGA-HYHIPLLLSPYGYSTYRGS 353
+ YYK N E+ YP+VE+ F+ ++ HYH+PL LSP+GYSTYRGS
Sbjct: 87 YITEPYYKAKNVESFYPYVEVVFNIRDATQHYHVPLTLSPWGYSTYRGS 135
>AF039042-10|AAC48252.2| 136|Caenorhabditis elegans Hypothetical
protein ZK697.8 protein.
Length = 136
Score = 95.9 bits (228), Expect = 1e-20
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +3
Query: 30 LSTHVLDISTGIPAVGLFVELYKKKDTSWTLWHNTVTSGDGRIQFPFSKDSMAEGVYKLK 209
+S HVLDIS G PA G+ + + + WT + T +GR+ + ++ G Y+L
Sbjct: 28 ISAHVLDISGGSPAGGIQILAFILLNNGWTNIGSQFTQDNGRVDWVSPDFTLIPGTYRLV 87
Query: 210 FNVSDYYKKTNTETLYPFVEITFHTKEGA-HYHIPLLLSPYGYSTYRGS 353
+ YY N E+ YP+VE+ F+ + HYH+PL LSP+GYSTYRGS
Sbjct: 88 YITEPYYTAKNVESFYPYVEVVFNIRNATQHYHVPLTLSPWGYSTYRGS 136
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 30.7 bits (66), Expect = 0.59
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 278 KGDFHKRVQCLRISFLIIITDIEL*FVNSFSHRVLRKRELYSTIAR 141
+GD+ K ++C+ S ++ EL V F H + RELY+ I R
Sbjct: 408 QGDYPKAIECIETSLDVLSK--ELNGVTCFRHLASQLRELYTVIGR 451
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 208 SSMSVIIIRKLIRRHCTLLWKSPFTQRKEHITT 306
S+ V+II K R+ L++KSP KE +TT
Sbjct: 307 STFVVLIIHKPYRQFIILIFKSPSVVHKESVTT 339
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 411 YLIGINVYTIPIPKIPFLSV 470
+L+ N+Y +P P+ PFL V
Sbjct: 264 HLVKTNIYPVPDPRFPFLGV 283
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical protein
F31D5.4 protein.
Length = 989
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 12 NMSRPVLSTHVLDISTGIPAVGLFVELYKKKDTSWTLWHNTVTSGDGRI 158
N+ ++S V+ IS G+P + F LY T W V G I
Sbjct: 888 NVITKIVSIVVMQISLGLPWILQFGTLYSPYTTFWHYTFTIVLGSQGTI 936
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 12 NMSRPVLSTHVLDISTGIPAVGLFVELYKKKDTSWTLWHNTVTSGDGRI 158
N+ ++S V+ IS G+P + F LY T W V G I
Sbjct: 870 NVITKIVSIVVMQISLGLPWILQFGTLYSPYTTFWHYTFTIVLGSQGTI 918
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,835,665
Number of Sequences: 27780
Number of extensions: 253114
Number of successful extensions: 575
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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