Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J10
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   5.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   5.3  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 251 IVPFCGNHLSHKGR 292
           ++  C +HL+HKG+
Sbjct: 566 MIQACSHHLTHKGK 579


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 107 YFMDPVAQHRDVWRW 151
           + ++P  QH D W W
Sbjct: 615 FVINPHQQHLDQWNW 629


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 KKTNTETLYPFVEI 272
           ++ NTE L P+VEI
Sbjct: 36  REMNTERLLPYVEI 49


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 KKTNTETLYPFVEI 272
           ++ NTE L P+VEI
Sbjct: 36  REMNTERLLPYVEI 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,763
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)