Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J09
         (157 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family pr...    28   0.97 
At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOA...    26   3.0  

>At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family
           protein
          Length = 343

 Score = 27.9 bits (59), Expect = 0.97
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 156 HLN*PLNTCVYSFCLTKI 103
           H N P+  C YS+CL KI
Sbjct: 307 HCNEPVTLCFYSYCLRKI 324


>At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOAT)
           family protein low similarity to porcupine from [Xenopus
           laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516;
           contains Pfam profile PF03062: MBOAT family
          Length = 465

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 39  ILSFLICRVITRCVF*YTYTFEFWSNKMSKHMYSTAN 149
           +L FL+C V T  +   ++ + F  +++ KH+YS A+
Sbjct: 19  VLRFLLCFVATIPI---SFLWRFIPSRLGKHIYSAAS 52


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,883,020
Number of Sequences: 28952
Number of extensions: 36514
Number of successful extensions: 73
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 12,070,560
effective HSP length: 32
effective length of database: 11,144,096
effective search space used: 211737824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)