Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J08
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032626-28|CAO82072.1|  337|Caenorhabditis elegans Hypothetical...    28   4.7  
AL032626-8|CAA21528.1|  335|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AL032626-28|CAO82072.1|  337|Caenorhabditis elegans Hypothetical
           protein Y37D8A.9b protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 380 RVMILSQFFLHCNYKINIINLELTVINAVSKYLNTI 273
           R +++  + L C Y INI+  E +V   +  Y+ TI
Sbjct: 135 RKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTI 170


>AL032626-8|CAA21528.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37D8A.9a protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 380 RVMILSQFFLHCNYKINIINLELTVINAVSKYLNTI 273
           R +++  + L C Y INI+  E +V   +  Y+ TI
Sbjct: 135 RKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTI 170


>Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical
           protein K03D10.3 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 518 INKDNIVNMFFIRFFIKIL*MVLLTGYRPPPRY*STLTNNYQ 393
           INK  +V  F I    K++ +++   +R PP+     TNNY+
Sbjct: 36  INKRYMVEKFIINTVKKVVAVIIHIDFRKPPQ--EVRTNNYK 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,689,271
Number of Sequences: 27780
Number of extensions: 162716
Number of successful extensions: 371
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)