Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J07
         (348 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17F44 Cluster: Threonine dehydratase/deaminase; n=9; E...    33   1.0  
UniRef50_A3J4G0 Cluster: Putative uncharacterized protein; n=1; ...    31   4.1  
UniRef50_P40113 Cluster: Protein RTM1; n=4; Saccharomyces cerevi...    31   4.1  
UniRef50_A6KWM6 Cluster: Putative thiol:disulfide interchange pr...    31   5.5  
UniRef50_A2DBI9 Cluster: Phospholipid-translocating P-type ATPas...    31   5.5  
UniRef50_A7AF36 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_A4CKQ3 Cluster: Cell wall hydrolase/autolysin; n=1; Rob...    30   9.5  

>UniRef50_Q17F44 Cluster: Threonine dehydratase/deaminase; n=9;
           Eumetazoa|Rep: Threonine dehydratase/deaminase - Aedes
           aegypti (Yellowfever mosquito)
          Length = 467

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 171 PTVLAKRKFVKSNSWCPEEDIEF-DAYCDADNPKTISYKDVVKA 299
           P  +     + +N    E++ EF D +C+ADNP+ I+++DV  A
Sbjct: 28  PEAVKNSTEMMTNGATSEQEQEFADPFCNADNPQIITFQDVTSA 71


>UniRef50_A3J4G0 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BAL38|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BAL38
          Length = 529

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 165 ESPTVLAKRKFVKSN--SWCPEEDIEFDAYCDADNPKTISYKDVVKAY 302
           E+P VL K+  VKSN   W      E D+    +  KT+S KD V  Y
Sbjct: 451 ETPLVLVKQILVKSNQEKW---SGSEIDSIIKLEKTKTVSIKDTVNIY 495


>UniRef50_P40113 Cluster: Protein RTM1; n=4; Saccharomyces
           cerevisiae|Rep: Protein RTM1 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 309

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = -2

Query: 329 FGISSLIGRICFYYVFITNSFWIVRITVRIELNIFFRTP*VRFYKFPLS*DCWRFPHSRF 150
           F  S  + R+C +Y  I+  +W + +T+ +   +      VR  +F    D +   H  F
Sbjct: 213 FRFSYSVARVCPFYRHISKKWWFLNLTLMLSSILIMVRSIVRLVEFVEGYDGFIISHEYF 272

Query: 149 LY 144
           +Y
Sbjct: 273 IY 274


>UniRef50_A6KWM6 Cluster: Putative thiol:disulfide interchange
           protein DsbE; n=1; Bacteroides vulgatus ATCC 8482|Rep:
           Putative thiol:disulfide interchange protein DsbE -
           Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC
           11154)
          Length = 702

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 108 PKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIEFDAYCDADN 263
           P F+++ + T  I++  + ++ TVL  + F + ++W     I  ++Y  ADN
Sbjct: 27  PPFIARSSSTIEIDRVVVSDTATVLDVKAFFRPHNWI---QISNESYLLADN 75


>UniRef50_A2DBI9 Cluster: Phospholipid-translocating P-type ATPase,
            flippase family protein; n=3; Trichomonas vaginalis|Rep:
            Phospholipid-translocating P-type ATPase, flippase family
            protein - Trichomonas vaginalis G3
          Length = 1162

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 222  EEDIEFDAYCDADNPKTISYKDVVKAYSTN*R*NTKDTT 338
            +ED+   AY D +NP   +++  V ++ T  R NT DTT
Sbjct: 1100 QEDVNIGAYPDVENPNGYAFEPPVNSFQTV-RYNTIDTT 1137


>UniRef50_A7AF36 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 307

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 186 KRKFVKSNSWCPEEDIEFDAYCDADNPKTISYKDVVKA 299
           KRK VK N+W   + I+ D       PKT+  K ++KA
Sbjct: 29  KRKAVKYNNWAEADGIDPDLSVVEFEPKTVKLKFLMKA 66


>UniRef50_A4CKQ3 Cluster: Cell wall hydrolase/autolysin; n=1;
           Robiginitalea biformata HTCC2501|Rep: Cell wall
           hydrolase/autolysin - Robiginitalea biformata HTCC2501
          Length = 203

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 153 TTMGESPT-VLAKRKFVKSNSWCPEEDIEFDAYCDADNPKTISYK 284
           T+ G++P+  +A R   +     P+E   FD Y D D  K +SY+
Sbjct: 108 TSKGDTPSDPVADRFLAQLEKDFPDETPRFDYYSDGDRDKEVSYR 152


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,758,007
Number of Sequences: 1657284
Number of extensions: 5390672
Number of successful extensions: 11108
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11103
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)