Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_J07
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 1.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 1.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 1.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 1.6
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 1.6
Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical pr... 27 3.7
AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical ... 27 3.7
Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical pr... 26 8.5
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 2205 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 2263
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 2264 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 2290
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 2734 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 2792
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 2793 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 2819
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 2415 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 2473
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 2474 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 2500
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 2205 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 2263
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 2264 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 2290
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 2734 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 2792
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 2793 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 2819
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 2415 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 2473
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 2474 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 2500
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 93 NNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSWCPEEDIE----FDAYCDAD 260
+ FA+PK L K + +TI T + + +V K VKS P+ IE F+ D
Sbjct: 1624 SRFALPKALRKQSGKYTITATNINGTDSVTINIK-VKSKPTKPKGPIEVTDVFEDRATLD 1682
Query: 261 -NPKTISYKDVVKAYSTN*R*NTKDTTW 341
P + ++ Y + NTKD W
Sbjct: 1683 WKPPEDDGGEPIEFYEIE-KMNTKDGIW 1709
>Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical
protein M28.4 protein.
Length = 735
Score = 27.1 bits (57), Expect = 3.7
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = +3
Query: 75 ITLNLFNNFAMPKFLSKPTDTFTIEKTTMGESPTVLAKRKFVKSNSW--CPEEDI--EFD 242
+ LN F N K + P TF+ EK + VK ++ C +ED E+
Sbjct: 484 LNLNAFRNMTNEKIMKLPNLTFSFEKHHEISFDKISHGYSTVKKSNLTDCDDEDAVQEYQ 543
Query: 243 AYCD-ADNPKTIS--YKDVVKAYSTN 311
Y + + ++S + D+VK S+N
Sbjct: 544 EYIELLEKSYSLSDQFVDIVKTLSSN 569
>Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical
protein K01C8.1 protein.
Length = 499
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 237 FDAYCDADNPKTISYKDVVKA 299
FD CD +NPK + + D+ A
Sbjct: 87 FDPDCDPENPKKLKFSDISSA 107
>AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.9 protein.
Length = 448
Score = 27.1 bits (57), Expect = 3.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 240 DAYCDADNPKTISYKDVVKAY 302
D +CD +NPK + + D+ A+
Sbjct: 28 DVFCDPENPKILQFGDISMAH 48
>Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical
protein T21B4.14 protein.
Length = 426
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 299 CFYYVFITNSFWIVRITVRIELNIFF 222
C YY+FI+ S + T R+++ FF
Sbjct: 313 CIYYLFISKSSHVSAQTRRLQIRSFF 338
>Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical
protein C14A4.3 protein.
Length = 603
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 184 ARTVGDSPIVVFSIVNVSVGLDKNLG 107
A GD+ IVVF+++ +++GL LG
Sbjct: 123 ANLFGDTKIVVFTLIRLTIGLFCLLG 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,208,473
Number of Sequences: 27780
Number of extensions: 134581
Number of successful extensions: 322
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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