Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_J04
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1Z305 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_Q96JR1 Cluster: PRO0996; n=1; Homo sapiens|Rep: PRO0996...    33   5.9  
UniRef50_Q233E2 Cluster: Putative uncharacterized protein; n=1; ...    32   7.8  

>UniRef50_Q1Z305 Cluster: Putative uncharacterized protein; n=1;
           Photobacterium profundum 3TCK|Rep: Putative
           uncharacterized protein - Photobacterium profundum 3TCK
          Length = 593

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -1

Query: 366 FAPPTKKKRLSLQQKFDTIESEVNNLNKVIRSF*ADLNPLWLHIIWEPRINPE 208
           F PP  KK  S   +     +E+ NL++ +R+  A L P W+  + E ++ PE
Sbjct: 384 FCPPELKKYFSGMDERRIRTNELLNLDESLRTHAASLYPRWVKSVLENKVEPE 436


>UniRef50_Q96JR1 Cluster: PRO0996; n=1; Homo sapiens|Rep: PRO0996 -
           Homo sapiens (Human)
          Length = 79

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 148 RVICILVCIVCGK*IISLVHFSYLRGIKYGVI 53
           R IC+ VC+VC   +    H+ +++G   G+I
Sbjct: 19  RYICVCVCVVCAYLVYMFTHYKHIQGKLKGII 50


>UniRef50_Q233E2 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1556

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -1

Query: 396  QK*TLTESKSFAPPTKKKRL--SLQQKFDTIESEVNNLNK 283
            +K  L ESK      +K+ +  S+Q+KFD+IE EVNNL +
Sbjct: 1418 EKNKLNESKLNEKNEQKENVNESMQKKFDSIEEEVNNLKQ 1457


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,783,990
Number of Sequences: 1657284
Number of extensions: 9580433
Number of successful extensions: 18557
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18555
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)