Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I20
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16842-1|AAA20046.1|  480|Homo sapiens ubiquinol-cytochrome c re...    30   4.5  
D26485-1|BAA05495.1|  480|Homo sapiens core I protein protein.         30   4.5  
BC009586-1|AAH09586.1|  480|Homo sapiens ubiquinol-cytochrome c ...    30   4.5  

>L16842-1|AAA20046.1|  480|Homo sapiens ubiquinol-cytochrome c
           reductase core I protein protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 139 PWLSAQASVTSRNPRRFASPDVRHRD 216
           PW  A+ +V +  P RF   ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279


>D26485-1|BAA05495.1|  480|Homo sapiens core I protein protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 139 PWLSAQASVTSRNPRRFASPDVRHRD 216
           PW  A+ +V +  P RF   ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279


>BC009586-1|AAH09586.1|  480|Homo sapiens ubiquinol-cytochrome c
           reductase core protein I protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 139 PWLSAQASVTSRNPRRFASPDVRHRD 216
           PW  A+ +V +  P RF   ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,965,691
Number of Sequences: 237096
Number of extensions: 1578629
Number of successful extensions: 3165
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3165
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)