Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I19
         (624 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q897E4 Cluster: Conserved protein; n=1; Clostridium tet...    36   0.60 
UniRef50_A5KA98 Cluster: Cloroquine resistance asscociatd protei...    35   1.8  
UniRef50_Q8I4W1 Cluster: Putative uncharacterized protein; n=2; ...    34   3.2  
UniRef50_A7PRN1 Cluster: Chromosome chr14 scaffold_27, whole gen...    33   4.2  
UniRef50_A1UQI9 Cluster: Transposase, mutator type; n=6; Bacteri...    33   5.6  
UniRef50_A1ULL0 Cluster: Epoxide hydrolase domain protein; n=4; ...    32   9.7  

>UniRef50_Q897E4 Cluster: Conserved protein; n=1; Clostridium
           tetani|Rep: Conserved protein - Clostridium tetani
          Length = 324

 Score = 36.3 bits (80), Expect = 0.60
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -2

Query: 368 NILSETFHNVLL*HFYGIDAIQNRKLQNQIKKNT*YIEKKKVVLYIIY 225
           NILSET H++L  H  GI     ++++  + KNT +  K  +  + IY
Sbjct: 41  NILSETIHSILEEHLIGIKNCNKKQIKISLLKNTIFNNKDNISYFDIY 88


>UniRef50_A5KA98 Cluster: Cloroquine resistance asscociatd protein
            Cg7, putative; n=1; Plasmodium vivax|Rep: Cloroquine
            resistance asscociatd protein Cg7, putative - Plasmodium
            vivax
          Length = 1271

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +1

Query: 76   SRPRGRGAHAAEPPLRRTTSCAGDHLGRGPRPRHTRLRLRQTPAL 210
            SR RGR     EPPL R  S A    G+ P P+ + LR +  P +
Sbjct: 1112 SRTRGRNLPGKEPPLGRHASLASHPRGKKPPPQRSLLRGKGFPGI 1156


>UniRef50_Q8I4W1 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 247

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 21/75 (28%), Positives = 37/75 (49%)
 Frame = -1

Query: 579 SQNAFARNKIYRITY*KKNSRSRGRNNLTTLRHAEQTGNXXXXXXXXRTNQLPSPIPLVI 400
           + N  A NKI  I Y   N  ++ RNNL +L++  + G+         T  +   +  +I
Sbjct: 91  NMNDLANNKINEIKYNTYNINNKKRNNLKSLKYLFKVGDILNIYGAVTTWSMGKMV--II 148

Query: 399 RHTAKHKHNGKHTIR 355
            +T + + +G+ TIR
Sbjct: 149 PNTTRIRKSGETTIR 163


>UniRef50_A7PRN1 Cluster: Chromosome chr14 scaffold_27, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr14 scaffold_27, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 110

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 73  ASRPRGRGAHAAEPPLRRTTSCAGDHLGRGPRPRHTRLR--LRQTPAL 210
           A RPRG   H+  P LRR    AG+  G     RH  LR  L +TP L
Sbjct: 57  AGRPRGSPLHSGGPGLRRQGDRAGEPAGEPDPVRHGLLRHQLLKTPHL 104


>UniRef50_A1UQI9 Cluster: Transposase, mutator type; n=6;
           Bacteria|Rep: Transposase, mutator type - Mycobacterium
           sp. (strain KMS)
          Length = 469

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 19/45 (42%), Positives = 21/45 (46%)
 Frame = +1

Query: 73  ASRPRGRGAHAAEPPLRRTTSCAGDHLGRGPRPRHTRLRLRQTPA 207
           A  PRGR  H  +   RRT+  AG       RPR  R RL Q  A
Sbjct: 369 AGIPRGRNCHGLQAYRRRTSPVAGSQRTPPGRPRPCRRRLPQRQA 413


>UniRef50_A1ULL0 Cluster: Epoxide hydrolase domain protein; n=4;
           Bacteria|Rep: Epoxide hydrolase domain protein -
           Mycobacterium sp. (strain KMS)
          Length = 367

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +1

Query: 373 VMLMFRRVSYYEGDWGGELISSSGTSARGAVACLFRVPEGREVVSTPRPT 522
           V L + R     GDWG  + +  G + RG VA    +P GR       PT
Sbjct: 156 VRLGYDRYGAQGGDWGAVITTQIGRNERGCVAIHTNMPIGRPPKDLANPT 205


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,111,972
Number of Sequences: 1657284
Number of extensions: 7995331
Number of successful extensions: 26924
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26861
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)