Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I19
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.5  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   7.9  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   7.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -2

Query: 479 RNKQATAPRADVPDELINSPP-QSPS*YDTRRNISITVNILSETFHNVLL*HFYGIDAIQ 303
           ++ QA   +A V     NS P Q P  Y+T R ISIT  I+    +  L+       ++Q
Sbjct: 68  KSGQAGITKATVTLIFDNSNPNQCPIGYETCREISITRQIVVGGKNKYLI----NGKSVQ 123

Query: 302 NRKLQN 285
           N+++Q+
Sbjct: 124 NKRVQD 129


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 WGGELISSSGTSARGAVACLFRVP 486
           W      S+GTS++  V+ + RVP
Sbjct: 10  WQQRSFPSTGTSSQSVVSIVLRVP 33


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 WGGELISSSGTSARGAVACLFRVP 486
           W      S+GTS++  V+ + RVP
Sbjct: 10  WQQRSFPSTGTSSQSVVSIVLRVP 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,593
Number of Sequences: 2352
Number of extensions: 8931
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)