SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I17
         (599 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    97   3e-19
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    77   4e-13
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease...    64   3e-09
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    48   2e-04
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    47   3e-04
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c...    47   3e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.003
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole...    42   0.008
UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep: Transpo...    36   0.55 
UniRef50_Q91TN8 Cluster: T50; n=1; Tupaiid herpesvirus 1|Rep: T5...    35   1.7  
UniRef50_A3U2J6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q0J555 Cluster: Os08g0465400 protein; n=1; Oryza sativa...    33   3.9  
UniRef50_A6PTP5 Cluster: Putative uncharacterized protein precur...    33   5.1  
UniRef50_A1VPU6 Cluster: Cobyrinic acid a,c-diamide synthase; n=...    33   5.1  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   9.0  
UniRef50_Q5LZV4 Cluster: Putative uncharacterized protein; n=2; ...    32   9.0  
UniRef50_Q3IMZ4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.0  
UniRef50_Q9P6R7 Cluster: Protein vts1; n=1; Schizosaccharomyces ...    32   9.0  
UniRef50_P51906 Cluster: Excitatory amino acid transporter 3; n=...    32   9.0  

>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 97.1 bits (231), Expect = 3e-19
 Identities = 51/74 (68%), Positives = 52/74 (70%)
 Frame = +2

Query: 257 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKPKILDSGGSMVAKLKLK 436
           F   RTKVRGSK IRYRPSSN K       +   M   A  GKPK L SGGSMVAKLKLK
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHKRCRLGIRECYWMTSLAPYGKPKFLGSGGSMVAKLKLK 65

Query: 437 GIDGRAPPGVEPAA 478
           GIDGRAPPGVEPAA
Sbjct: 66  GIDGRAPPGVEPAA 79


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 76.6 bits (180), Expect = 4e-13
 Identities = 46/78 (58%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKP----KILDSGGSMVAK 424
           FH  RTKV GSK IRY PS N K             R    G P    K L SGGSMVA+
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK-----------RCRLGIGGSPYEKSKFLGSGGSMVAR 54

Query: 425 LKLKGIDGRAPPGVEPAA 478
           LKLKGIDGRAPPGVEPAA
Sbjct: 55  LKLKGIDGRAPPGVEPAA 72


>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
           n=4; Eukaryota|Rep: RRNA intron-encoded homing
           endonuclease - Oryza sativa (Rice)
          Length = 66

 Score = 63.7 bits (148), Expect = 3e-09
 Identities = 33/46 (71%), Positives = 34/46 (73%)
 Frame = +2

Query: 341 SADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 478
           SADV      A   K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 21  SADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 66


>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
           NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
           Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
           (Candida sphaerica)
          Length = 119

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = -2

Query: 589 PTKNGHAPPPTESRKSC*SVNPSGVRAW 506
           PTKNGHAPPPT+SRKS  SVNP  V  W
Sbjct: 92  PTKNGHAPPPTKSRKSSQSVNPYCVWTW 119


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 573 MHHHPPNQERAVNLSILPVSGPG 505
           MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1   MHHHPQNRERAINLSILSVSGPG 23


>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
           coactivator subunit SRm300; n=1; Monodelphis
           domestica|Rep: PREDICTED: similar to splicing
           coactivator subunit SRm300 - Monodelphis domestica
          Length = 598

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 573 MHHHPPNQERAVNLSILPVSGPG 505
           MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1   MHHHPQNRERAINLSILSVSGPG 23


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 248 GKCFR*CSSCDDPRISPLTSQYECPQ 171
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284



 Score = 39.9 bits (89), Expect = 0.045
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -3

Query: 588 QLRTAMHHHPPNQERAVNL 532
           +L+TAMHHHP NQERA+NL
Sbjct: 179 ELKTAMHHHPRNQERAINL 197


>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3131,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 36

 Score = 42.3 bits (95), Expect = 0.008
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +1

Query: 370 GSFRETKDFGLRGEYGCKAET 432
           GS RETK FG RGEYGCKAET
Sbjct: 16  GSVRETKVFGFRGEYGCKAET 36


>UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep:
           Transposase - Zea mays (Maize)
          Length = 738

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -3

Query: 444 SIPLSFSFATILPPESKIFGFPEAARRAIVVTSAD 340
           +IPL +SFA IL P +K+ GF    RR + +TS D
Sbjct: 505 NIPLLYSFAFILDPRAKMKGFSRVLRRLMNLTSTD 539


>UniRef50_Q91TN8 Cluster: T50; n=1; Tupaiid herpesvirus 1|Rep: T50 -
           Tupaiid herpesvirus 1 (strain 1) (TuHV-1) (Herpesvirus
           tupaia (strain1))
          Length = 340

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 23/76 (30%), Positives = 34/76 (44%)
 Frame = -3

Query: 522 PVSGPGEISRVESNKAAGSTPGGALPSIPLSFSFATILPPESKIFGFPEAARRAIVVTSA 343
           P + PG   R  +  A+ + PGGA PS  ++ S   +    S  FGF    R    ++S 
Sbjct: 258 PPASPGAAGRRATGAASRTWPGGAAPSAAVAPSSTLLAGAPSARFGFGPWVRSPRAISSV 317

Query: 342 DR*MTYLRLELGRYLI 295
                 L L LG Y++
Sbjct: 318 VLAAVGLALILGGYVL 333


>UniRef50_A3U2J6 Cluster: Putative uncharacterized protein; n=1;
           Oceanicola batsensis HTCC2597|Rep: Putative
           uncharacterized protein - Oceanicola batsensis HTCC2597
          Length = 418

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +2

Query: 338 RSADVTTMARRAASGKPKIL-DSGGSMVAKLKLKGIDGRAPPGVEPAALFDSTREISPGP 514
           + A V T+  + A+G P +  D GG  + +L + G++GR  P  +PAA+  +  E +  P
Sbjct: 316 QDAPVNTLKEQMATGMPVVATDHGG--IPELVIDGVNGRLVPERDPAAIARAIGEFADEP 373


>UniRef50_Q0J555 Cluster: Os08g0465400 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os08g0465400 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 109

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +2

Query: 386 PKILDSGGSMVAKLKLKGIDGRAPPGVEPAALFDSTREISPGPDT 520
           P++L    SMVA L   G++ ++P  + P  LFD+ +  +P P +
Sbjct: 8   PRMLSISASMVASLN--GMEKKSPTAMHPHHLFDNAQRTAPAPSS 50


>UniRef50_A6PTP5 Cluster: Putative uncharacterized protein
           precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
           Putative uncharacterized protein precursor - Victivallis
           vadensis ATCC BAA-548
          Length = 116

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 21/72 (29%), Positives = 29/72 (40%)
 Frame = -3

Query: 525 LPVSGPGEISRVESNKAAGSTPGGALPSIPLSFSFATILPPESKIFGFPEAARRAIVVTS 346
           LP S P E    E+       P  A+  IPL  + A +  PE ++   P   R    +  
Sbjct: 25  LPASAPAEEQMPEAEATPAPVPSAAVEEIPLPVTPAAVPVPEPEVEVEPPPLRAVFPLAQ 84

Query: 345 ADR*MTYLRLEL 310
           A R   Y  LE+
Sbjct: 85  ALREARYNLLEI 96


>UniRef50_A1VPU6 Cluster: Cobyrinic acid a,c-diamide synthase; n=2;
           Betaproteobacteria|Rep: Cobyrinic acid a,c-diamide
           synthase - Polaromonas naphthalenivorans (strain CJ2)
          Length = 444

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 356 TMARRAASGKPKILDSGGSMVAKLKLKGIDGRAPP--GVEPAALFDSTREISPGP 514
           ++ R   +GKP   + GG M    KL G+DG + P  G+ P ++    R  + GP
Sbjct: 313 SITRHVQAGKPVWAECGGMMALFDKLTGVDGESQPMCGILPGSVTMQKRLAALGP 367


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -3

Query: 237 SLMFVLRRSKNFTSNVAIRMPPVIPINHYLG 145
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


>UniRef50_Q5LZV4 Cluster: Putative uncharacterized protein; n=2;
           Streptococcus thermophilus|Rep: Putative uncharacterized
           protein - Streptococcus thermophilus (strain CNRZ 1066)
          Length = 67

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -3

Query: 594 STQLRTAMHHHPPNQERAVNLSILPVSGPGEISRVESNKAAGSTPGGALPSIPLS 430
           S  + T +  HP  +E  +NL   P+S P  ++ V   K      G  L +IPLS
Sbjct: 12  SQPVATIIKEHPEVKELLINLGFKPLSNPAMLNTV--GKVTSLKAGSKLSNIPLS 64


>UniRef50_Q3IMZ4 Cluster: Putative uncharacterized protein; n=1;
           Natronomonas pharaonis DSM 2160|Rep: Putative
           uncharacterized protein - Natronomonas pharaonis (strain
           DSM 2160 / ATCC 35678)
          Length = 577

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 28/110 (25%), Positives = 47/110 (42%)
 Frame = +2

Query: 203 KFLDRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASG 382
           +F D   T I  S+    F  +   VRG   IR  P +NR  ++  S D++  + +A + 
Sbjct: 153 EFQDPPDTVIEHSLLYNEFRNAELTVRGQTVIR--PETNRINLVLFSGDISRSSSQAVTL 210

Query: 383 KPKILDSGGSMVAKLKLKGIDGRAPPGVEPAALFDSTREISPGPDTGRID 532
            P+ LD G +    L+  G + R         +++     SPG +    D
Sbjct: 211 DPETLD-GPTGTIPLEPAGDEMRIQLPTRKPEIWEDELAGSPGVNVNAED 259


>UniRef50_Q9P6R7 Cluster: Protein vts1; n=1; Schizosaccharomyces
           pombe|Rep: Protein vts1 - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 713

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = -3

Query: 597 RSTQLRTAMHHHPPNQERAVNLSILPVSGPGEISRVESNKAAGSTPGGALPSIPLSFSFA 418
           R T LRT + HH P+QE +  LS    S P   S +  +K+  S+P G  PS+  S    
Sbjct: 124 RLTTLRTLL-HHLPSQEISTLLSSSLTSSPSN-SGLSLDKSLPSSPKGDSPSLSSSLPSL 181

Query: 417 T 415
           T
Sbjct: 182 T 182


>UniRef50_P51906 Cluster: Excitatory amino acid transporter 3; n=16;
           Coelomata|Rep: Excitatory amino acid transporter 3 - Mus
           musculus (Mouse)
          Length = 523

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
 Frame = +2

Query: 44  TN*SAQSGLKMLLEYFVHGIIEYDLGSILLVFRTPXXXXXXXXXXXXXXXXEVK----FL 211
           +N S + GL+ ++ YF   +I   LG +L+V   P                EV      L
Sbjct: 84  SNVSGKIGLRAVVYYFSTTVIAVILGIVLVVSIKPGVTQKVNDINRTGKTPEVSTIDAML 143

Query: 212 DRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMA 364
           D  +    E++ Q CF Q +TK    K +   P  N   V   +A +TTM+
Sbjct: 144 DLIRNMFPENLVQACFQQYKTKREEVKPVG-DPGGNATEVSVTTA-MTTMS 192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,064,027
Number of Sequences: 1657284
Number of extensions: 13849090
Number of successful extensions: 39837
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 38245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39823
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -