Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I17
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical ...    32   0.36 
Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z47808-12|CAB61003.1|  902|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z47808-11|CAD36487.1|  928|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z35595-13|CAA84639.2|  902|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z35595-12|CAD36478.1|  928|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z35595-11|CAJ34992.1|  769|Caenorhabditis elegans Hypothetical p...    31   0.83 
AJ132947-1|CAC29085.1|  902|Caenorhabditis elegans receptor tyro...    31   0.83 
AJ132946-1|CAC29084.1|  928|Caenorhabditis elegans receptor tyro...    31   0.83 
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    31   0.83 
U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF045642-10|AAC02587.1|  459|Caenorhabditis elegans Hypothetical...    27   7.7  

>AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical
           protein Y32F6A.3 protein.
          Length = 655

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 543 AVNLSILPVSGPGEISRVESNKAAGSTPGG-ALPSIPLSFSFATILPPESKIFGFPEAAR 367
           A N S+   S P  + R  S  +  +TP G A P  PLS S +    P+S   G P + +
Sbjct: 513 ATNTSVSS-STPRSVVRTTSTSSVPTTPTGLAAPKTPLSASVSATNEPDSTTNGTPLSRK 571

Query: 366 RAI 358
           R++
Sbjct: 572 RSM 574


>Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical
           protein F45E6.4 protein.
          Length = 333

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 454 CPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSN 350
           CP  ++F F  C     G++  +FPG+CP   CS+
Sbjct: 203 CPCQHAFAFPAC-----GMETGFFPGTCPEMTCSS 232


>Z47808-12|CAB61003.1|  902|Caenorhabditis elegans Hypothetical
           protein C01G6.8b protein.
          Length = 902

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 481 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 530


>Z47808-11|CAD36487.1|  928|Caenorhabditis elegans Hypothetical
           protein C01G6.8a protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 507 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 556


>Z35595-13|CAA84639.2|  902|Caenorhabditis elegans Hypothetical
           protein C01G6.8b protein.
          Length = 902

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 481 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 530


>Z35595-12|CAD36478.1|  928|Caenorhabditis elegans Hypothetical
           protein C01G6.8a protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 507 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 556


>Z35595-11|CAJ34992.1|  769|Caenorhabditis elegans Hypothetical
           protein C01G6.8c protein.
          Length = 769

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 348 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 397


>AJ132947-1|CAC29085.1|  902|Caenorhabditis elegans receptor
           tyrosine kinase protein.
          Length = 902

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 481 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 530


>AJ132946-1|CAC29084.1|  928|Caenorhabditis elegans receptor
           tyrosine kinase protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 377 SGKPKILDSGGSMVAKLKLKG----IDGRAPPGVEPAALFDSTREISPGP 514
           S  P +++S  +     KL G    I GR PP VE  +L  S + + P P
Sbjct: 507 SSAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPP 556


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 467 EPAALFDSTREISPGPDTGRIDRL 538
           EP+ALFD+  ++ PG    RIDR+
Sbjct: 100 EPSALFDNANDLLPGQKEERIDRM 123


>U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical
           protein D1022.9 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 459 QEWSLRLYLTQHGKSHQARTPEGLTD*QLFLD 554
           Q W L L    H K + ARTP  + D ++F++
Sbjct: 59  QYWPLMLARFSHEKPYVARTPAAIADAEMFIN 90


>AF045642-10|AAC02587.1|  459|Caenorhabditis elegans Hypothetical
           protein C17H12.9 protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +2

Query: 341 SADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAAL 481
           S DVTT++  A S    I++S    +A+++      ++P G  PAAL
Sbjct: 168 SFDVTTVSTTATS---TIMNSTDKFIARIQEADSTTKSPKGTSPAAL 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,962,402
Number of Sequences: 27780
Number of extensions: 321781
Number of successful extensions: 869
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)