Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_I15
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 213 3e-55
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 213 3e-55
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 213 3e-55
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 213 3e-55
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 213 3e-55
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 213 3e-55
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 213 3e-55
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 212 1e-54
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 35 0.26
AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens ... 31 4.3
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 30 5.7
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 29 9.9
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 29 9.9
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 3e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 212 bits (517), Expect = 1e-54
Identities = 98/117 (83%), Positives = 107/117 (91%)
Frame = -3
Query: 453 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 274
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 273 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 103
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +R+QRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGT 120
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.26
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 246 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 115
+++ + LDL K E RLA EKK+ +K++K++K + KK
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKKK 1500
>AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ20288 fis, clone HEP04414. ).
Length = 686
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 246 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 115
+++ LDL K E + A EK++ RK++K++K + KK
Sbjct: 640 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKKKKKKKKK 683
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 246 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 124
+++ + LDL K E RLA EK++ R+++KE + R
Sbjct: 1340 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKEEQRR 1380
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 86 PTLDFLVPRTFFILFLRSLRCL 151
P L FL+P FI+FL +LRCL
Sbjct: 1199 PFLVFLIPFLHFIIFLFTLRCL 1220
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 86 PTLDFLVPRTFFILFLRSLRCL 151
P L FL+P FI+FL +LRCL
Sbjct: 1169 PFLVFLIPFLHFIIFLFTLRCL 1190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,063,262
Number of Sequences: 237096
Number of extensions: 1656308
Number of successful extensions: 4105
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4104
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -