Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_I10
(152 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 60 7e-09
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 58 3e-08
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 53 1e-06
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 49 2e-05
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 48 3e-05
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 48 5e-05
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 46 1e-04
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 44 9e-04
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 42 0.003
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 42 0.003
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 40 0.008
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 38 0.032
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 38 0.032
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 33 1.2
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 32 2.8
UniRef50_Q8EUR5 Cluster: Putative lipoprotein; n=1; Mycoplasma p... 30 8.5
UniRef50_Q08XP5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 60.5 bits (140), Expect = 7e-09
Identities = 26/33 (78%), Positives = 32/33 (96%)
Frame = +2
Query: 53 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQ 33
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/32 (78%), Positives = 31/32 (96%)
Frame = +2
Query: 56 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
SI++YNGGAV+AMKG++CVAIA D+RFGIQAQ
Sbjct: 26 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQ 57
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 53 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQ 33
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 53 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
MSILA+NG AV+ M G+DC AIA D RFG+ Q
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQ 33
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2
Query: 53 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
MSI YNG AVVAM G++C AIA+D+R G+Q Q
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQ 33
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 56 SILAYNGGAVVAMKGQDCVAIATDKRFG 139
SI+ YNGGA++AMKG++CVA ATD R G
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLG 28
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2
Query: 59 ILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
I +YNGGA+VAM G+ CVAIA DKR G+ Q
Sbjct: 18 ITSYNGGALVAMMGEGCVAIACDKRLGLNQQ 48
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 43.6 bits (98), Expect = 9e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 53 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQ 145
MSI++Y GG VVAM G +CV IA+D R G Q
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQ 31
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 41.5 bits (93), Expect = 0.003
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 68 YNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
Y+GGAVV M G+ CVAIA D R+G++ Q
Sbjct: 8 YSGGAVVGMAGKGCVAIAADNRYGLKYQ 35
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 41.5 bits (93), Expect = 0.003
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 56 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ 151
+I YNG A++ +KG DCVA+A DKR G Q
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQ 34
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 40.3 bits (90), Expect = 0.008
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 59 ILAYNGGAVVAMKGQDCVAIATDKRFGIQ 145
++ YNG A+VAM G CV IA+D R+G++
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVR 32
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 38.3 bits (85), Expect = 0.032
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +2
Query: 56 SILAYNGGAVVAMKGQDCVAIATDKRFG 139
SI YNGG V+ M G CVAIA D R G
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLG 30
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 38.3 bits (85), Expect = 0.032
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 53 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQ 145
MSIL Y+GG+ +AM G++C + +D R G Q
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQ 31
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 44 DYKMSILAYNGGAVVAMKGQDCVAIATDKR 133
++K S A+NGG V+A+ G+D +A+D R
Sbjct: 24 EHKFSPYAFNGGTVLAVAGEDFALVASDTR 53
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 86 VAMKGQDCVAIATDKRFGI 142
VAM G+DCVAIA+D R GI
Sbjct: 10 VAMVGKDCVAIASDLRLGI 28
>UniRef50_Q8EUR5 Cluster: Putative lipoprotein; n=1; Mycoplasma
penetrans|Rep: Putative lipoprotein - Mycoplasma
penetrans
Length = 532
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 5 NIRKNILQ*IFNQDYKMSILAYNGGAVVAMKGQDCVAIATDK 130
N NIL F D +I++YNG AM+G D + T+K
Sbjct: 289 NSDSNILLNDFAADNSQAIISYNGDLFFAMQGGDIFSSTTNK 330
>UniRef50_Q08XP5 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 390
Score = 30.3 bits (65), Expect = 8.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 144 WIPKRLSVAIATQSWPFIATTAPP 73
W+ + ++ A+AT+SWP + APP
Sbjct: 280 WLVRLITGALATESWPPVTAGAPP 303
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,136,465
Number of Sequences: 1657284
Number of extensions: 1954559
Number of successful extensions: 4639
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4639
length of database: 575,637,011
effective HSP length: 31
effective length of database: 524,261,207
effective search space used: 9960962933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -