Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I10
         (152 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   1.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   1.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   2.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   3.2  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 106 VLALHRNNCTSI 71
           ++ LH N CTS+
Sbjct: 21  IIGLHNNMCTSL 32


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 2   NNIRKNILQ*IFNQDYKMSILAYNG 76
           NNI    +Q IFN      +++ NG
Sbjct: 292 NNIEYEGIQDIFNTQSSAKVMSKNG 316


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 2   NNIRKNILQ*IFNQDYKMSILAYNG 76
           NN++   +Q IFN +    I++ NG
Sbjct: 292 NNVQYQGVQDIFNTESIAKIMSKNG 316


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 23  LQ*IFNQDYKMSILAYNGGAVVAMKGQDCV 112
           LQ  + ++YKM  L     + V  K +DC+
Sbjct: 401 LQDKYYEEYKMYELGELASSFVGPKVKDCL 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,553
Number of Sequences: 438
Number of extensions: 604
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2664060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)