BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0001_I06 (369 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 27 1.2 SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosac... 26 1.6 SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 2.1 SPAC23H3.03c |||nitrogen permease regulator family|Schizosacchar... 26 2.1 SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces p... 26 2.1 SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 25 2.8 SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 25 4.9 >SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 474 Score = 26.6 bits (56), Expect = 1.2 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +3 Query: 129 IFKGECRAKFPSYGYNTSTKTCELFYYGGCNGNSNRFDTQLAC 257 +F E R +F YN +K L +G + N +F+T C Sbjct: 246 LFIDEKRDEFQERLYNDYSKESHLLQHGSHSFNGKQFETSFNC 288 >SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosaccharomyces pombe|chr 2|||Manual Length = 358 Score = 26.2 bits (55), Expect = 1.6 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +3 Query: 96 VNEPPPECLQPIFKGECRAKFPSYGYNTSTKTCELFYYGGCNGNSNRFDTQLAC 257 V +P LQP G+ +A T+ K ++GG + N F T + C Sbjct: 227 VYKPGNVKLQPALLGQHQAYVKEQLKTTNDKPVFFVFHGGSGSSVNEFRTGIKC 280 >SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 2363 Score = 25.8 bits (54), Expect = 2.1 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = +3 Query: 132 FKGECRAKFPSYGYNTSTKTCELFYYGGCNGNSNRFDTQLACEEACNV 275 F+ + R FPS+ + ++ L Y C G +N D CNV Sbjct: 951 FEADRRHLFPSWVKPSDSEPPPLLVYKWCQGINNLTDVWETSNGECNV 998 >SPAC23H3.03c |||nitrogen permease regulator family|Schizosaccharomyces pombe|chr 1|||Manual Length = 409 Score = 25.8 bits (54), Expect = 2.1 Identities = 13/48 (27%), Positives = 19/48 (39%) Frame = +3 Query: 48 CVILLFIFIVHSVICSVNEPPPECLQPIFKGECRAKFPSYGYNTSTKT 191 C+I+ IF H++ P P F+ EC A + N T Sbjct: 252 CLIIADIFQFHNIYAMTTNAPNLLQDPDFQRECTAYVSTNSSNAKNVT 299 >SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces pombe|chr 2|||Manual Length = 832 Score = 25.8 bits (54), Expect = 2.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 160 GNFALHSPLKMGCRHSGGGSLTLQ 89 G FA+ P C +SGGGS L+ Sbjct: 331 GTFAVIGPNAKVCNYSGGGSANLK 354 >SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 473 Score = 25.4 bits (53), Expect = 2.8 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +3 Query: 132 FKGECRAKFPSYGYNTSTKTCELFYYGGCNGNS 230 F+GECR+K+ +N ++T L G +S Sbjct: 290 FEGECRSKYNERTFNIFSETFSLLPLGSLISDS 322 >SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 756 Score = 24.6 bits (51), Expect = 4.9 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 162 SYGYNTSTKTCELFYYGG 215 S+GYN S+ + FYY G Sbjct: 60 SFGYNASSSLIDDFYYKG 77 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,428,512 Number of Sequences: 5004 Number of extensions: 26842 Number of successful extensions: 61 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 61 length of database: 2,362,478 effective HSP length: 65 effective length of database: 2,037,218 effective search space used: 116121426 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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