Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_I06
(369 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01930.1 68417.m00257 DC1 domain-containing protein contains ... 28 2.2
At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P4... 27 2.9
At2g03750.1 68415.m00335 sulfotransferase family protein similar... 27 3.9
At2g28470.1 68415.m03460 beta-galactosidase, putative / lactase,... 27 5.2
At3g21670.1 68416.m02732 nitrate transporter (NTP3) nearly ident... 26 6.8
At2g27395.1 68415.m03308 cysteine protease-related contains simi... 26 6.8
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 26 6.8
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 26 9.0
At3g26240.1 68416.m03274 DC1 domain-containing protein contains ... 26 9.0
At2g43990.1 68415.m05470 expressed protein 26 9.0
>At4g01930.1 68417.m00257 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 135 KGECRAKFPSYGYNTSTKTCELFYYGGCNGNSNRF 239
KG+C +F + KTC+ F + C S+ +
Sbjct: 24 KGDCCRRFEAISDGYYCKTCDFFVHKSCGDRSSEY 58
>At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P450
77A3p, Glycine max, PIR:T05948
Length = 509
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 6 FIFLFFTLTSAMSKCVILLFIFIVHSVICSVNEPP 110
++F FFTL + + C++ + H+ C+ N PP
Sbjct: 7 YVFFFFTLVTILLSCLVYILTRHSHNPKCA-NLPP 40
>At2g03750.1 68415.m00335 sulfotransferase family protein similar to
similar to steroid sulfotransferase 3 [Brassica napus]
GI:3420008, steroid sulfotransferase 1 [Brassica napus]
GI:3420004; contains Pfam profile PF00685:
Sulfotransferase domain
Length = 351
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 94 VLMNPHQNVYNPFLKVNAEQNSQVTDI 174
+L NPH V PFL+V NSQ+ D+
Sbjct: 127 LLQNPHDLV--PFLEVELYANSQIPDL 151
>At2g28470.1 68415.m03460 beta-galactosidase, putative / lactase,
putative similar to Beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 852
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 153 KFPSYGYNTSTKTCELFYYGGCNGNSNRFDTQLAC--EEACNV 275
KF S+G T TC F G CN + + Q AC +CNV
Sbjct: 787 KFASFG--TPKGTCGSFTQGHCNSSRSLSLVQKACIGLRSCNV 827
>At3g21670.1 68416.m02732 nitrate transporter (NTP3) nearly
identical to nitrate transporter [Arabidopsis thaliana]
GI:4490323; contains Pfam profile: PF00854 POT family
Length = 590
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 323 NVKVITIYNKIYVNSVNVASFLTRKLGVETI 231
N+ TIY+++ +V A+F+ RKLG T+
Sbjct: 345 NILFWTIYSQMTTFTVEQATFMDRKLGSFTV 375
>At2g27395.1 68415.m03308 cysteine protease-related contains
similarity to senescence-specific cysteine protease
GI:5823018 from [Brassica napus]
Length = 86
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 129 IFKGECRAKFPSYGYN 176
IF GEC F S GYN
Sbjct: 34 IFNGECETDFASCGYN 49
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 267 KLPHT-QVGCRNDWSYRCSRRNRT 199
KLPH +DW+YR S+R+RT
Sbjct: 126 KLPHLLHDNDSDDWNYRPSKRSRT 149
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 78 HSVICSVNEPPPECLQPIFKGECRAKFPSYGYNT 179
H +C V PPP C P K ++ P Y YN+
Sbjct: 664 HPHVC-VCPPPPPCYSPSPKVVYKSPPPPYVYNS 696
>At3g26240.1 68416.m03274 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 922
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 162 SYGYNTSTKTCELFYYGGCNGNSNRFDTQLACEEACNVH 278
SYG TS T ++ C G N + C+E C VH
Sbjct: 793 SYGKKTSDMT---YWCEACEGKINPEEGFYRCDEYCCVH 828
>At2g43990.1 68415.m05470 expressed protein
Length = 632
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/60 (23%), Positives = 24/60 (40%)
Frame = +3
Query: 81 SVICSVNEPPPECLQPIFKGECRAKFPSYGYNTSTKTCELFYYGGCNGNSNRFDTQLACE 260
S +C+++ I+K R S N + + C+G ++ FDT CE
Sbjct: 376 SDLCNISSGRSLSPMDIYKETTRRISSSLSPNELFRFRRFIHLSSCDGEASAFDTSPTCE 435
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,328,465
Number of Sequences: 28952
Number of extensions: 138129
Number of successful extensions: 385
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 487896136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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