Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I05
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81579-9|CAN99688.1|  225|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    29   3.4  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z81579-9|CAN99688.1|  225|Caenorhabditis elegans Hypothetical
           protein R13H4.2a protein.
          Length = 225

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 462 LTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLSTRY 608
           L +D  ++ YYY+   +   ++ S RY    +     Y+N Y    TRY
Sbjct: 71  LYDDYWYDKYYYFSPLYRSTYYPSRRYSYSDYLPNPYYWNNYGSYWTRY 119


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 100 RLLLFSTCSTMLKTLKPSTRVPLSLV 177
           R+  F TCS  +KT+K    +PLS+V
Sbjct: 290 RIEQFLTCSETIKTVKSDALIPLSIV 315


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/56 (23%), Positives = 29/56 (51%)
 Frame = +1

Query: 139 TLKPSTRVPLSLVCT*MRDSSCTHIILQLSSAMILMDSFYQLLMKFIHNSSLIWTL 306
           T  P T  PLS+ CT ++  S   ++ +++   + +DS +  ++  +H   +  T+
Sbjct: 256 TADPQTNEPLSITCT-VKSVSKASVLWKVNGIKVSVDSSFYTVVTSVHEDFIESTI 310


>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 75  IFYQKLREEAIALFHLFYYAKDFETFYKSA-AFARVHLNEGQFLYAYYIA 221
           +FY       IA F  + Y K  +T YKSA AF R  L  G+FL AY +A
Sbjct: 101 VFYGWATATEIAYF-AYIYVKVPKTEYKSATAFTRAALLVGRFL-AYALA 148


>AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical
           protein K03H6.2 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 510 HLPFWWSSERYGNLKHRRGEIYYNFYQQLSTRY 608
           HLPF +    +  + H R EI+YN    + + Y
Sbjct: 264 HLPFQYELVDHDKMYHHRTEIWYNNDMSIGSSY 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,475,677
Number of Sequences: 27780
Number of extensions: 277076
Number of successful extensions: 709
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)