Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I04
         (387 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 199 AWRCSFGNRTRELRGLHPGSRGLLP 273
           AW  SFG      + L P   GL P
Sbjct: 243 AWVASFGRPKMTPQSLLPSQTGLSP 267


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 275 IQVECHTDYELLKLCQRCAKLT*SKLG 355
           ++++C   Y   + C+ CA++  S  G
Sbjct: 784 LEIKCKRIYNEKQCCKNCARVDYSMNG 810


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 129 VVKKMSVIFFSAKNSATCVL 188
           ++  +S IFF+  N A C L
Sbjct: 164 ILSHLSGIFFTVFNVAQCYL 183


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 215 NEHRQADEQQYAGC*IFRGEKNHRHFFNH 129
           N  RQA +QQ         + +H H  +H
Sbjct: 301 NSQRQAAQQQNNNNAATNNQNHHHHAGHH 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,075
Number of Sequences: 336
Number of extensions: 1967
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)