Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_I03
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein pr... 34 0.33
X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F... 33 0.57
BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein pr... 30 5.3
BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription ... 30 5.3
BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein. 30 5.3
AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein. 30 5.3
BC059402-1|AAH59402.1| 842|Homo sapiens round spermatid basic p... 29 9.3
>BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein
protein.
Length = 1582
Score = 34.3 bits (75), Expect = 0.33
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 88 HVLGAAPKPFDKHTFMPSALDFYQTALRDPAFYQLYNRIVGYINAFKHYLK-PYPQEKLH 264
H+ APK FD+ T + +D + D YQ Y RI+ I A + P E LH
Sbjct: 1337 HLYAWAPKSFDESTAIKVCIDQSADSEGDYMSYQAYIRILAKIQAADPVNRFKRPDELLH 1396
Query: 265 FVGVKINDVVVEKLVT 312
+ +K+ + K VT
Sbjct: 1397 LLKLKVFPTLDHKPVT 1412
>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
protein protein.
Length = 4590
Score = 33.5 bits (73), Expect = 0.57
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = -3
Query: 522 GESXIVVLRSQEDLXNGISGNIGLNVDGNTERLVVESWLTNLEVVWVTSL 373
G S ++ +R+ D +G +G + ++D + V+ES+ N+E W+T+L
Sbjct: 2826 GGSRVIQIRAS-DADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTL 2874
>BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein
protein.
Length = 2150
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 76 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPY 246
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 928 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 986
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 142 ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 321
AL + ALR P ++Y + ++ FK+ LK YPQ H + L + +
Sbjct: 929 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 988
Query: 322 YSQ 330
Y Q
Sbjct: 989 YGQ 991
>BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription
complex, subunit 1 protein.
Length = 1551
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 76 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPY 246
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 933 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 991
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 142 ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 321
AL + ALR P ++Y + ++ FK+ LK YPQ H + L + +
Sbjct: 934 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Query: 322 YSQ 330
Y Q
Sbjct: 994 YGQ 996
>BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.
Length = 1620
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 76 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPY 246
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 177 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 235
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 142 ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 321
AL + ALR P ++Y + ++ FK+ LK YPQ H + L + +
Sbjct: 178 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 237
Query: 322 YSQ 330
Y Q
Sbjct: 238 YGQ 240
>AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.
Length = 1835
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 76 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPY 246
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 392 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 450
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 142 ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 321
AL + ALR P ++Y + ++ FK+ LK YPQ H + L + +
Sbjct: 393 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 452
Query: 322 YSQ 330
Y Q
Sbjct: 453 YGQ 455
>BC059402-1|AAH59402.1| 842|Homo sapiens round spermatid basic
protein 1-like protein.
Length = 842
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 304 LVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPR 414
L F DY F+ NS L KK+I+T+ NF + R
Sbjct: 411 LPDFLDYFSFNFPNSPVLGKKDIETTTMSNFHAQVKR 447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,823,164
Number of Sequences: 237096
Number of extensions: 1625894
Number of successful extensions: 6644
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6644
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -