Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_I01
(561 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48181| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_19001| Best HMM Match : MBOAT (HMM E-Value=2.2) 33 0.12
SB_38003| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_28772| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_36734| Best HMM Match : SH2 (HMM E-Value=0.00043) 29 2.0
SB_45534| Best HMM Match : 7tm_1 (HMM E-Value=1e-10) 27 7.9
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_23356| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_23355| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_48181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 36.7 bits (81), Expect = 0.013
Identities = 28/130 (21%), Positives = 50/130 (38%)
Frame = -3
Query: 418 KIFLKLYHRFVT*NLLRRTGKKLSKYYLVFEYIHIEHLLMTFFFKLYHRFVTYNLLKRTG 239
K F +H F LRR + V+ Y ++ + ++ FF +H F +
Sbjct: 43 KFFASSFHTFEN---LRRISSDRHSFSRVY-YKYLSNRILKFFASSFHTFENLRRISSDR 98
Query: 238 KKLSKYYILFEYIHIEHLIMKIFKRLYHRFVTYNLLKRTGKKLSKYYILFEYIHIEHLIM 59
S++Y Y ++ + I K F +H + S+ Y Y ++ + I
Sbjct: 99 HSFSRFY----YKYLSNRISKFFASSFHTSENLRRISSDRHSFSRVY----YKYLSNRIS 150
Query: 58 KIFKRLYHRF 29
K F +H F
Sbjct: 151 KFFASSFHTF 160
>SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1239
Score = 33.9 bits (74), Expect = 0.091
Identities = 32/150 (21%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Frame = -3
Query: 472 LSKYYLVFEYINIEHLIIKIFLKLYHRFVT*NLLRRTGKKLSKYYLVFEYIHIE-HLLMT 296
L+ +Y VF + + F +++HR ++ L+ +Y VF + + + +T
Sbjct: 485 LTFFYQVFHRVTCQSYGSLTFYQVFHRITC-----QSSGSLTFFYQVFHRVTCQSNGSLT 539
Query: 295 FFFKLYHRFVTYNLLKRTGKKLSKYYILFEYIHIE-HLIMKIFKRLYHRFVTYNLLKRTG 119
FF++L+HR ++ L+ +Y +F I + + + +F R++HR ++
Sbjct: 540 FFYRLFHRVTC-----QSNGSLTFFYQVFHRITCQSNGSLTLFYRVFHRVTC-----QSN 589
Query: 118 KKLSKYYILFEYIHIE-HLIMKIFKRLYHR 32
L+ +Y +F I + + + F +++HR
Sbjct: 590 GSLTFFYQVFHRITCQSNGSLTFFYQVFHR 619
>SB_19001| Best HMM Match : MBOAT (HMM E-Value=2.2)
Length = 596
Score = 33.5 bits (73), Expect = 0.12
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Frame = -3
Query: 559 LPPVLLIKVNILRLYHRFVT*NLLRTGKKLSKYYLVFEYINIEHLIIKIFLKLYHRFVT* 380
LP LI L++ HR + SKY++V Y+ + H +L + H
Sbjct: 412 LPSEYLIVYAYLKVLHRLRLPQSTSSSMPTSKYFIVNAYLGVLHRY--AYLGVLHCL--- 466
Query: 379 NLLRRTGKK--LSKYYLVFEYIHIEHLLMTFFFKLYHRFVTYNLLKR--------TGKKL 230
L R T SKY++V+ Y+ + H L T +L R +
Sbjct: 467 RLPRSTSSSTPTSKYFIVYAYLEVLHRLRQ-LRSTSSSTPTLGVLNRLRLPQSTSSFTPT 525
Query: 229 SKYYILFEYIHIEHLI 182
SKY+I++ Y+ + H +
Sbjct: 526 SKYFIVYAYLGVLHCL 541
>SB_38003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 33.1 bits (72), Expect = 0.16
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = -3
Query: 463 YYLVFEYINIEHLIIKIFLKLYHRFVT*NLLRRTGKKLSKYYLVFEYIHIE-HLLMTFFF 287
+Y VF + + + F +++HR ++ L+ +Y VF + + + +TFF+
Sbjct: 280 FYQVFHRVTCQSIGSLTFYQVFHRITC-----QSSGSLTFFYHVFHRVTCQSNGSLTFFY 334
Query: 286 KLYHRFVTYNLLKRTGKKLSKYYILFEYIHIE-HLIMKIFKRLYHR 152
+L+HR ++ LS +Y +F I + + + F R++HR
Sbjct: 335 RLFHRVTC-----QSNGSLSFFYQVFHRITCQSNGSLTFFYRVFHR 375
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/107 (19%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = -3
Query: 463 YYLVFEYINIEHL-IIKIFLKLYHRFVT*NLLRRTGKKLSKYYLVFEYIHIE-HLLMTFF 290
+Y VF + + + + F +++HR ++ L+ +Y VF + + + +TFF
Sbjct: 87 FYQVFHRVTCQSIGSLTFFYQVFHRITC-----QSNGSLTFFYQVFHRVTCQSNGSLTFF 141
Query: 289 FKLYHRFVTYNLLKRTGKKLSKYYILFEYIHIEHL-IMKIFKRLYHR 152
++++HR ++ L+ +Y +F + + + F +++HR
Sbjct: 142 YQVFHRITCQSI-----GSLTFFYQVFHRVTCQSKGSLTFFYQVFHR 183
>SB_28772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 205 YIHIEHLIMKIFKRLYHRFVTYNLLKRTGKKLSKYYILFEYIHIEHLIMKIFKRLYHRFV 26
Y I H+ + ++R++H F + T +++ +I Y I H+ + ++R++H F
Sbjct: 129 YQQIHHMFISTYQRIHHMFTS------TYQQIHHMFI-STYQQIHHMFISTYQRIHHMFT 181
Query: 25 T 23
+
Sbjct: 182 S 182
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/66 (18%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = -3
Query: 325 YIHIEHLLMTFFFKLYHRFVT-----YNLLKRTGKKLSKYYILFEYIHIEHLIMKIFKRL 161
Y I H+ ++ + +++H F + +++ T +++ +I Y I H+ ++++
Sbjct: 129 YQQIHHMFISTYQRIHHMFTSTYQQIHHMFISTYQQIHHMFIS-TYQRIHHMFTSTYQQI 187
Query: 160 YHRFVT 143
+H F++
Sbjct: 188 HHMFIS 193
>SB_36734| Best HMM Match : SH2 (HMM E-Value=0.00043)
Length = 661
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 298 TFFFKLYHRFVTYNLLKRTG-KKLSKYYILFEYIHIEHLIMKI-FKRLYHRFVTYNLLKR 125
T + + Y R VTY+ + G K+L Y ++ + + + +KR Y R VTY+ +
Sbjct: 249 TCYKRGYKRLVTYSTCYKRGYKRLVTYSTCYKRGYKKLVTSSTCYKRGYKRLVTYSTCYK 308
Query: 124 TGKKLSKYY 98
G YY
Sbjct: 309 RGLPFDLYY 317
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Frame = -3
Query: 298 TFFFKLYHRFVTYNLLKRTG-KKLSKYYILFEYIHIEHLIMK--IFKRLYHRFVTYNLLK 128
T + + Y R VT + + G ++L Y ++ + + L+ +KR Y R VTY+
Sbjct: 151 TCYKRGYKRLVTSSTCYKRGYQRLVTYSTCYKRGY-QRLVTSSTCYKRGYKRLVTYSTCY 209
Query: 127 RTG-KKLSKYYILFEYIHIEHLIMK--IFKRLYHRFVTYN 17
R G ++L Y ++ + + L+ +KR Y R VTY+
Sbjct: 210 RRGYQRLVTYSTCYKRGY-KRLVTSSTCYKRGYKRLVTYS 248
Score = 28.3 bits (60), Expect = 4.5
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = -3
Query: 298 TFFFKLYHRFVTYNLLKRTG-KKLSKYYILFEYIHIEHLIMK--IFKRLYHRFVTYN-LL 131
T + + Y R VTY+ R G ++L Y ++ + + L+ +KR Y R VTY+
Sbjct: 193 TCYKRGYKRLVTYSTCYRRGYQRLVTYSTCYKRGY-KRLVTSSTCYKRGYKRLVTYSTCY 251
Query: 130 KRTGKKLSKYYILFEYIHIEHLI--MKIFKRLYHRFVT 23
KR K+L Y ++ + + L+ +KR Y + VT
Sbjct: 252 KRGYKRLVTYSTCYKRGY-KRLVTYSTCYKRGYKKLVT 288
>SB_45534| Best HMM Match : 7tm_1 (HMM E-Value=1e-10)
Length = 548
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 487 RTGKKLSKYYLVFEYINIEHLIIKIFLKL 401
R KKL + L F ++N + +K+ LK+
Sbjct: 58 RISKKLQTWLLTFTFVNTNYCYLKLLLKI 86
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 167 TTLPPVRYLQSAEKNRQETQQILYF 93
+T+ V YLQS NRQ+ ++LYF
Sbjct: 187 STMVQVCYLQSHMNNRQKAWELLYF 211
>SB_23356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 421 IKIFLKLYHRFVT*NLLRRTGKKLSK 344
++ +K++HR++ N R+T +KLSK
Sbjct: 104 LRRLVKIFHRYMLCNKSRKTNRKLSK 129
>SB_23355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 409 LKLYHRFVT*NLLRRTGKKLSK 344
+K++HR++ N R+T +KLSK
Sbjct: 192 VKIFHRYLLRNKARKTNRKLSK 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,778,192
Number of Sequences: 59808
Number of extensions: 275271
Number of successful extensions: 555
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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