Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_I01
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr...    31   0.75 
Z83107-8|CAB05504.1|  348|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF047657-9|AAK18945.1|  329|Caenorhabditis elegans Seven tm rece...    28   4.0  
Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z54218-2|CAA90956.1|  352|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
           protein K02B12.5 protein.
          Length = 1204

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
 Frame = -3

Query: 286 KLYHRFVTYNLLKRTGKKLSKYYILFEYIHIEHLIMKIFKR--LYHRFVTYNLLKRTGK- 116
           +L H+++  N L +  K L++ Y   E     H +    KR  + +R V YN +++  + 
Sbjct: 240 ELSHQYLLANRLDKAYKSLAEAYFFHEARFPAHELEDTVKRICIIYRLVKYNKIRKNPQM 299

Query: 115 --KLSKYYILFE-----YIHIEHLIMKIFKRLYHRFVTYNLL 11
             KLSK   L+E     Y      +M   K+ Y +FV  N+L
Sbjct: 300 EPKLSKCQ-LYEAIGDLYDQYFQTLMAKEKKEYRQFVRDNIL 340


>Z83107-8|CAB05504.1|  348|Caenorhabditis elegans Hypothetical
           protein F32A7.7 protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 214 LFEYIHIEHLIMKIFKRLYHRFVTYNLLKRTGKKLSKYYILFEYIHIEHL 65
           +F Y HI   ++ IF  + +  + Y + K+T  KL  Y  L  +I +  L
Sbjct: 1   MFPYYHIVERVIGIFGIIINATLIYLIAKKTVTKLGNYRFLMMHISLFEL 50


>AF047657-9|AAK18945.1|  329|Caenorhabditis elegans Seven tm
           receptor protein 39 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -3

Query: 343 YYLVFEYIHIEHLLMTFFFKLYHRFVTYNLLKRTGKKLSKYYILFEYIHIEHLIMKIFKR 164
           ++ VFE+I +     T F  L   F+T   +K+      K  ILF  + I   I  I +R
Sbjct: 2   FHKVFEFITVTSFFATLFSNLLLIFITTFYVKQIVGSYKKMIILFAGLGI---IFSIVER 58

Query: 163 LYHRFV-TYN 137
           +   F+  YN
Sbjct: 59  IAKPFIHNYN 68


>Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical
           protein T06G6.1 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = -3

Query: 295 FFFKLYHRFVTYNLLKRTGKKL-----SKYYILFEY-IHIEHLIMKIFKRLYHRFVTYNL 134
           +F+ L + F TY++   T  +L     SKYY + +Y I I  L+++    +   ++ Y+ 
Sbjct: 114 YFYYLTNYFSTYSVFSLTFDRLISHYKSKYYHMHQYFIAISLLVLQFLLAILSFYIAYHG 173

Query: 133 LKRTG-KKLSKYYILFEYIHI 74
           +   G   +  YY      HI
Sbjct: 174 VPLAGYVPMCNYYPKMAVHHI 194


>Z54218-2|CAA90956.1|  352|Caenorhabditis elegans Hypothetical
           protein F37B12.3 protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = -3

Query: 370 RRTGKKLSKYYLVFEYIHIEHLLMTFFFKLYHRFVTYNLLKRTGKKLSKYYILFEYIHIE 191
           +++ K   +YYL+F Y +  +L  + F+ LY RF   N++     +  K Y+    I I+
Sbjct: 69  QKSEKAFPEYYLIFSYTNELYLQNSRFYILY-RFFKPNII-FLQNQFEKLYLRNMIIRIQ 126

Query: 190 HL 185
            L
Sbjct: 127 ML 128


>AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical
           protein T22B2.3 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -3

Query: 454 VFEYINIEHLIIKIFLKLYH 395
           +F++++I   II+IFL++YH
Sbjct: 345 IFDFLSIFFCIIRIFLEVYH 364


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,798,886
Number of Sequences: 27780
Number of extensions: 244551
Number of successful extensions: 572
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)