SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H24
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   4.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.3  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   7.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   9.3  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +1

Query: 382 LLPKPHFETLHSIRLYYRIV 441
           ++PK +F T  +++ +Y++V
Sbjct: 55  IIPKSYFGTTTNLKRFYKVV 74


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 352 VEWFRCCTEHMASDNFIRSLIILCNFFFIQIGVL 251
           ++W R     +AS  FI   I LC+  +  IG +
Sbjct: 275 IKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTV 308


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 352 VEWFRCCTEHMASDNFIRSLIILCNFFFIQIGVL 251
           ++W R     +AS  FI   I LC+  +  IG +
Sbjct: 293 IKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTV 326


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 292 IILCNFFFIQIGVLLPIVSDKVNCLFIV 209
           I  C FF I   +LL I     + LFI+
Sbjct: 407 ITACKFFSIDNALLLSICGASSSYLFIM 434


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 11  WYSPIKTGYYPLMTSY 58
           W+SP    Y+P   SY
Sbjct: 71  WHSPRFHAYFPTANSY 86


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 393 TALRDPAFYQ 422
           TA+RDP FY+
Sbjct: 392 TAMRDPIFYR 401



 Score = 21.0 bits (42), Expect = 5.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 14  YSPIKTGYYPLMTSYYFPFAQRPDN 88
           Y  IK   YP   S  +PF + P N
Sbjct: 626 YCGIKDKLYPDRRSMGYPFDRMPRN 650


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 407 PCILSGYITGLWV 445
           P   S Y+TG+WV
Sbjct: 122 PIHTSSYMTGIWV 134


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 407 PCILSGYITGLWV 445
           P   S Y+TG+WV
Sbjct: 355 PIHTSSYMTGIWV 367


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 407 PCILSGYITGLWV 445
           P   S Y+TG+WV
Sbjct: 355 PIHTSSYMTGIWV 367


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 5/19 (26%), Positives = 14/19 (73%)
 Frame = +1

Query: 382 LLPKPHFETLHSIRLYYRI 438
           ++PK +F T  +++ +Y++
Sbjct: 55  IIPKSYFGTTTNLKRFYKV 73


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 224 LPFHRGNQFSCHTIRICL 171
           + FH G+Q   HT++  L
Sbjct: 378 ITFHIGSQLVLHTVKTVL 395


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 207 STMKRQLTLSETIGKRTPICMKKKLQRI 290
           S+++ + +     GKRTP+  + K+  +
Sbjct: 236 SSLRPRSSQKSAPGKRTPLISRAKINTV 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,200
Number of Sequences: 336
Number of extensions: 2311
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

- SilkBase 1999-2023 -