Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H22
(261 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP7G5.05 |rpl1002|rpl10-2, rpl10|60S ribosomal protein L10|Sch... 150 3e-38
SPBC18E5.04 |rpl1001|rpl10-1, rpl10|60S ribosomal protein L10|Sc... 150 3e-38
SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual 30 0.044
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 26 0.95
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 0.95
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 0.95
SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|c... 25 2.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 2.2
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 24 3.8
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 24 3.8
SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces po... 24 3.8
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 23 5.1
SPBC18H10.20c |||conserved fungal protein|Schizosaccharomyces po... 23 6.7
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 23 6.7
SPBC14F5.05c |sam1||S-adenosylmethionine synthetase |Schizosacch... 23 6.7
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz... 23 6.7
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 23 8.8
SPAC27E2.05 |cdc1|mis1|DNA polymerase delta small subunit Cdc1|S... 23 8.8
SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 8.8
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 23 8.8
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 23 8.8
SPAC2F7.13c |||tryptophan-tRNA ligase |Schizosaccharomyces pombe... 23 8.8
SPBC31F10.08 |mde2||Mde2 protein|Schizosaccharomyces pombe|chr 2... 23 8.8
>SPAP7G5.05 |rpl1002|rpl10-2, rpl10|60S ribosomal protein
L10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 221
Score = 150 bits (363), Expect = 3e-38
Identities = 66/83 (79%), Positives = 74/83 (89%)
Frame = +1
Query: 13 MGRRPARCYRYCKNKPYPKSRFCRGVPEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 192
M RRPARCYRYCKNKPYPKSR+ R VP+ KIRIFDLG+KRA VD+FPLC+HLVS+EYEQ+
Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQI 60
Query: 193 SSEALEAGRICCNKYLVKNCGKD 261
+SEALEA RIC NKYLVK GKD
Sbjct: 61 TSEALEAARICANKYLVKIGGKD 83
>SPBC18E5.04 |rpl1001|rpl10-1, rpl10|60S ribosomal protein
L10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 221
Score = 150 bits (363), Expect = 3e-38
Identities = 66/83 (79%), Positives = 74/83 (89%)
Frame = +1
Query: 13 MGRRPARCYRYCKNKPYPKSRFCRGVPEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 192
M RRPARCYRYCKNKPYPKSR+ R VP+ KIRIFDLG+KRA VD+FPLC+HLVS+EYEQ+
Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQI 60
Query: 193 SSEALEAGRICCNKYLVKNCGKD 261
+SEALEA RIC NKYLVK GKD
Sbjct: 61 TSEALEAARICANKYLVKIGGKD 83
>SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 30.3 bits (65), Expect = 0.044
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 37 YRYCKNKPYPKSRFCRGV-PEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 213
Y+ N ++FC V E KI + +KRA +D LC+ +S + E ++ +LE+
Sbjct: 34 YQKVPNSHKEFTKFCYEVYNEIKISDKEFKEKRAALDTLRLCLKRISPDAELVAFGSLES 93
Query: 214 G 216
G
Sbjct: 94 G 94
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 25.8 bits (54), Expect = 0.95
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 94 EPKIRIFDLGKKRATVDDFPLCV-HLVSDEYEQLSSEALEA 213
+PK+R+F KRAT + C LV+ + + S +++A
Sbjct: 320 DPKLRVFPFTTKRATHSELLRCYKELVTPKISHVDSISIKA 360
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 25.8 bits (54), Expect = 0.95
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 208 PAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLVQA 89
P P +S+ R Q+LSA + S+P S PS GSL +
Sbjct: 473 PKPSSSSRRRSQSLSAMLKTSNPYMPS--PSLLSGSLANS 510
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 0.95
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +1
Query: 115 DLGKKRATVDDFPLCVHLVSDEYEQL---SSEALEAGRICCN--KYLVKNCGK 258
++ KKRA DD + +VS EYE L SS+ ++ N KY+ KN K
Sbjct: 1033 EIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQK 1085
>SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 2.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 119 WAKRERQWMTSH 154
W +RERQW+ H
Sbjct: 91 WLRRERQWLQRH 102
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 24.6 bits (51), Expect = 2.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 103 SLVQAHPDKTEI*DTVYSYNIDNISLVGAP 14
SLVQ++P KT + Y + ISLV P
Sbjct: 1027 SLVQSNPVKTVVSLESYKFTTSKISLVKNP 1056
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 23.8 bits (49), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 184 EQLSSEALEAGRICCN 231
E LSS+ + RICCN
Sbjct: 262 ESLSSQQMSCLRICCN 277
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 23.8 bits (49), Expect = 3.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 109 YGSLVQAHPDKTEI*DTVYSYNIDNISLVGAPLCSP 2
Y SLV PD E YS+ + N S + SP
Sbjct: 36 YNSLVHHEPDLEEAAHASYSWVVKNFSTLEDKTYSP 71
>SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 23.8 bits (49), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 153 WEVIHCRSLFAQVENTDLWFRHTPT 79
+ ++H +LFA EN D + PT
Sbjct: 343 YAILHWNTLFANEENWDSYIPQDPT 367
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 23.4 bits (48), Expect = 5.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 109 IFDLGKKRATVDDFPLCVH 165
IFD AT+DD CVH
Sbjct: 143 IFDFLTLSATIDDTIFCVH 161
>SPBC18H10.20c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 361
Score = 23.0 bits (47), Expect = 6.7
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Frame = +1
Query: 40 RYCKNKPYPKSRFCRGVPE-------PKIRIFDLGKKRATVDDFPLCVH 165
RY K + Y ++ C G PE P++ F L KRA + P +H
Sbjct: 126 RYIKLEYYLEATLCYGTPEGGISPSKPEVLKFPLQLKRAAIPS-PDTIH 173
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 23.0 bits (47), Expect = 6.7
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 70 SRFCRGVPEPKIRIFDLGKKRATVDDFP-LCVHLVSDE 180
S FC P+PK K A DD P + H+ S++
Sbjct: 84 SFFCTTTPDPKTESPSFVKYNAHCDDHPEISGHVSSND 121
>SPBC14F5.05c |sam1||S-adenosylmethionine synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 382
Score = 23.0 bits (47), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 181 THQTLSARIVGSHPLSLSFCPSRKYGSLVQAHPD-KTEI 68
T + L I+ +H L+ + +R+ GSL PD KT++
Sbjct: 133 TPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQV 171
>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 23.0 bits (47), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 42 SITSRWSAPHC 10
+I SRW PHC
Sbjct: 496 TIKSRWEIPHC 506
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 22.6 bits (46), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 178 HQTLSARIVGSHPLSLSFCPSRKYGSLV 95
H LSA I+G +++ C R Y SLV
Sbjct: 109 HYYLSAMIIGWSLVTIFTCFVRHYWSLV 136
>SPAC27E2.05 |cdc1|mis1|DNA polymerase delta small subunit
Cdc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 22.6 bits (46), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 117 VENTDLWFRHTPTKP 73
+ENT LW TPT P
Sbjct: 363 MENTLLWNHITPTSP 377
>SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 159
Score = 22.6 bits (46), Expect = 8.8
Identities = 5/20 (25%), Positives = 14/20 (70%)
Frame = +1
Query: 151 PLCVHLVSDEYEQLSSEALE 210
P+C+ + DE+E++ ++ +
Sbjct: 66 PICIDNIPDEFEEIDAKTFD 85
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 22.6 bits (46), Expect = 8.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 1 VENTMGRRPARCYRYCKNKPYPKSRFCRGVPEPKIRI 111
++N PA R KN P S F P P I +
Sbjct: 262 MQNPHNSFPASADRLQKNHPVQSSNFNPYTPAPSITV 298
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 22.6 bits (46), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 178 EYEQLSSEALEAGRICCNKYLVKNCGKD 261
EY +LSSEAL + N+Y N D
Sbjct: 454 EYYRLSSEALSIFKAYKNRYSFVNTACD 481
>SPAC2F7.13c |||tryptophan-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 395
Score = 22.6 bits (46), Expect = 8.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 69 ISVLSGCA*TKDPYFRL 119
I L CA +DPYFRL
Sbjct: 229 IPCLIPCAIDQDPYFRL 245
>SPBC31F10.08 |mde2||Mde2 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 209
Score = 22.6 bits (46), Expect = 8.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 97 PKI--RIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 198
PKI + +GK ++ FPL + +S Q SS
Sbjct: 93 PKIINDVLVIGKSDGLINSFPLSQNYISSSESQTSS 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,106,660
Number of Sequences: 5004
Number of extensions: 20114
Number of successful extensions: 65
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 51430850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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