Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H22
         (261 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4321| Best HMM Match : Ank (HMM E-Value=0)                          28   1.0  
SB_45328| Best HMM Match : DUF1162 (HMM E-Value=6.1e-09)               28   1.4  
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)               27   3.2  
SB_28796| Best HMM Match : LIM (HMM E-Value=5.2)                       27   3.2  
SB_25288| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.2  
SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.2  
SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5)                      27   3.2  
SB_5680| Best HMM Match : fn3 (HMM E-Value=1.1e-17)                    26   4.2  
SB_38734| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.5  
SB_59387| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.3  
SB_41446| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.7  
SB_39610| Best HMM Match : WSC (HMM E-Value=0.003)                     25   9.7  
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.7  
SB_17486| Best HMM Match : CheR (HMM E-Value=3.2)                      25   9.7  
SB_5389| Best HMM Match : UPF0020 (HMM E-Value=9.7e-36)                25   9.7  
SB_52361| Best HMM Match : EutS (HMM E-Value=1)                        25   9.7  
SB_30957| Best HMM Match : DEAD (HMM E-Value=4.3)                      25   9.7  
SB_30503| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.7  
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 25   9.7  

>SB_4321| Best HMM Match : Ank (HMM E-Value=0)
          Length = 915

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +1

Query: 40  RYCKNKPYPKSRFCRGVPEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 219
           R CK K   ++R C+G    + R+     K    D+  +C    SDE      E  +  R
Sbjct: 444 RMCKGKGRDETRMCKGEGTDETRMC----KSEGTDETRMCKDEGSDETRMCKDEGTDETR 499

Query: 220 IC 225
           +C
Sbjct: 500 MC 501


>SB_45328| Best HMM Match : DUF1162 (HMM E-Value=6.1e-09)
          Length = 1508

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = -3

Query: 232  CC--NRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYG-SLVQAHPDKTEI*D 62
            CC  N  G L + ++ A    +  S   + SH    + C  R Y    +Q+H D   +  
Sbjct: 1017 CCRVNSVGRLQSHEDGATVCCRVYSVGRLQSHEDGATVC-CRVYSVGRLQSHEDGATVCW 1075

Query: 61   TVYSYNIDNISLVGAPLC 8
             VYS N   + +V + +C
Sbjct: 1076 RVYSVNFSRMKMVRSSVC 1093


>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
          Length = 1486

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 40  RYCKNKPYPKSRFCRGVPEPKIRIFDLGKKRATVDDF 150
           RYC     PKS  C G+   ++   D        D+F
Sbjct: 622 RYCATSAIPKSLSCLGIARRQLNFGDASLSSTEYDNF 658


>SB_28796| Best HMM Match : LIM (HMM E-Value=5.2)
          Length = 625

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 163 ARIVGSHPLSLSFCPSRKYGSLVQ 92
           A I  +HP  +  CP+ K G+LVQ
Sbjct: 444 ASIEQAHPSDMWVCPTNKMGALVQ 467


>SB_25288| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 90

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = -3

Query: 241 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLVQAHPDKTEI 68
           RG C  R   +    + ++R     S +I      S S C   KY S +  H   ++I
Sbjct: 32  RGMCARRLSWVMPAFSQSSRCIMAASPKIAFQQVDSWSICTLAKYSSTIMEHLHTSQI 89


>SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 869

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 163 ARIVGSHPLSLSFCPSRKYGSLVQ 92
           A I  +HP  +  CP+ K G+LVQ
Sbjct: 608 AAIEQAHPSDMWVCPTNKMGALVQ 631


>SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5)
          Length = 932

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 163 ARIVGSHPLSLSFCPSRKYGSLVQ 92
           A I  +HP  +  CP+ K G+LVQ
Sbjct: 751 ASIEQAHPSDMWVCPTNKMGALVQ 774


>SB_5680| Best HMM Match : fn3 (HMM E-Value=1.1e-17)
          Length = 188

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 205 APQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLVQAHPDKT 74
           AP N  AR+H + S R V  HP+   +  +   G +V   P  T
Sbjct: 71  APMNVTARSHDSRSIR-VSWHPIPSEYHHALLQGYIVFYRPSNT 113


>SB_38734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 164

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 187 QLSSEALEAGRICCNKYLVKN 249
           +LS E LE  R CC+KY   N
Sbjct: 3   ELSEEQLEMLRSCCHKYFCIN 23


>SB_59387| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 806

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 100 KIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 189
           K+R FD  +    +DD     H  SDE ++
Sbjct: 12  KLRTFDTSEHETHLDDLKKVAHTASDESDE 41


>SB_41446| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 337

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 175 DEYEQLSSEALEAGRICCNKYLVKNCGKD 261
           D YE L+SE      IC N +L K+C +D
Sbjct: 289 DIYESLTSERPRKCEICGNSFL-KSCFED 316


>SB_39610| Best HMM Match : WSC (HMM E-Value=0.003)
          Length = 264

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 25  PARCYRYCKNKPYPKSRFCRGVPEPKIRIFDLGK 126
           PA C R CK + YP +    G   P + IF   K
Sbjct: 144 PAMCVRECKKERYPFAALHDGKSMP-VEIFSESK 176


>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 654

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 169 LSARIVGSHPLSLSFCPSRKYGSLVQ 92
           L A I  +HP  +  C + K G+LVQ
Sbjct: 580 LDAAIEQAHPSDMWVCSTNKMGALVQ 605


>SB_17486| Best HMM Match : CheR (HMM E-Value=3.2)
          Length = 1177

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 175  QTLSARIVGSHPLSLSFCPSRKYGSLVQ 92
            Q   A I  +HP  +  C + K G+LVQ
Sbjct: 950  QQFDAAIEQAHPSDMWVCSTNKMGALVQ 977


>SB_5389| Best HMM Match : UPF0020 (HMM E-Value=9.7e-36)
          Length = 392

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 145 DFPLCVHLVSDEYEQLSSEAL 207
           ++PLCVH+  D +E   S  L
Sbjct: 250 NWPLCVHICGDHHELAPSRTL 270


>SB_52361| Best HMM Match : EutS (HMM E-Value=1)
          Length = 682

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 143 STVALFLPKSKIRIFGSGTPRQNRDLGYGLFLQYR*HLAGR 21
           STVA+FLP  ++R   + T R   ++ + L +    H A R
Sbjct: 122 STVAMFLPDRQVRHKKAETTRMRSEMPHQLAIGLAIHQAVR 162


>SB_30957| Best HMM Match : DEAD (HMM E-Value=4.3)
          Length = 314

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 169 LSARIVGSHPLSLSFCPSRKYGSLVQ 92
           L A I  +HP  +  C + K G+LVQ
Sbjct: 240 LDAAIEQAHPSDMWVCSTNKMGALVQ 265


>SB_30503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1402

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 31  RCYRYCKNKPYPKSRFCRGVPEPKIRIFDLGKKR 132
           + ++YC  +  PK + C  +P   +R F+  K R
Sbjct: 580 KTHKYCYGRIIPKGKHCVKLPRCGMRFFNPMKYR 613


>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 1507

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 93  RHTPTKPRFRIRFILTISITSRWSAPHCVL 4
           RH  +K  +RI+  + + I  RW AP C+L
Sbjct: 393 RHLYSKHYYRIQGRVILPI--RWMAPECIL 420


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,649,487
Number of Sequences: 59808
Number of extensions: 162173
Number of successful extensions: 766
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 16,821,457
effective HSP length: 63
effective length of database: 13,053,553
effective search space used: 300231719
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)