BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H22
(261 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 156 2e-39
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 29 0.45
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL117193-21|CAB60306.2| 318|Caenorhabditis elegans Hypothetical... 26 3.2
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 3.2
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 4.2
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 25 5.6
U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical pr... 25 5.6
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 25 5.6
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 25 5.6
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 25 5.6
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 25 5.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 25 5.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 25 5.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 5.6
U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 25 7.4
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 25 7.4
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 25 7.4
Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF026204-7|AAB71247.1| 272|Caenorhabditis elegans Hypothetical ... 25 9.8
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl... 25 9.8
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 156 bits (378), Expect = 2e-39
Identities = 68/83 (81%), Positives = 73/83 (87%)
Frame = +1
Query: 13 MGRRPARCYRYCKNKPYPKSRFCRGVPEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 192
MGRRPARCYRY KNKPYPKSRFCRGVP+ KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 193 SSEALEAGRICCNKYLVKNCGKD 261
SSEALEA RIC NKY+VKNCGKD
Sbjct: 61 SSEALEAARICANKYMVKNCGKD 83
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 73 RFCRGVPEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 219
R C + + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -3
Query: 220 YGLLPAPQNSA--ARTHQTLSARIVGSHPLSLSFCPSRKYGSLVQAHPDKTEI*DTVYSY 47
Y L P PQ S +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 46 NIDN 35
+ N
Sbjct: 288 DHQN 291
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 82 RGVPEPKIRIFDLGKKRATVDDF 150
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 82 RGVPEPKIRIFDLGKKRATVDDF 150
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 82 RGVPEPKIRIFDLGKKRATVDDF 150
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 82 RGVPEPKIRIFDLGKKRATVDDF 150
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AL117193-21|CAB60306.2| 318|Caenorhabditis elegans Hypothetical
protein Y105C5A.14 protein.
Length = 318
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 83 GVCLNQRSVFSTWAKRERQWMTSHYAC 163
G+ LN+ S WA+ + HYAC
Sbjct: 215 GIVLNKEETLSDWAREVLRIDQIHYAC 241
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 82 RGVPEPKIRIFDLGKKRATVDDF 150
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 91 PEPKIRIFDLGKKRATVDDFPLCVHLV 171
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 91 PEPKIRIFDLGKKRATVDDFPLCVHLV 171
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 91 AHPDKTEI*DTVYSYNIDNISLVGAPL 11
AH +K I D + NI+ ISLVG PL
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPL 836
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 91 AHPDKTEI*DTVYSYNIDNISLVGAPL 11
AH +K I D + NI+ ISLVG PL
Sbjct: 840 AHSNKLNIGDQII--NINGISLVGLPL 864
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 25.4 bits (53), Expect = 5.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 83 GVCLNQRSVFSTWAK 127
G+C +R +F TWA+
Sbjct: 162 GICNKERKIFETWAR 176
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 25 PARCYRYCKNKPYPKSRFCRGVPEPKIRIF 114
PA CYR P P++ +GVP R+F
Sbjct: 166 PAVCYRTIYTLPPPENFAAQGVPSAFNRMF 195
>U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical
protein C32D5.6 protein.
Length = 578
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 70 SRFCRGVPEPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEA 204
S+ RG+ E R++++ K +DD+ L L LS A
Sbjct: 454 SKMVRGIVEDMDRVWEMKKSTCDIDDYCLYYFLKGVALRHLSLHA 498
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 16 GRRPARCYRYCKNKPYPKSRFCRGVPEPK 102
GRRPA Y Y + +P VP+P+
Sbjct: 287 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 315
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 91 AHPDKTEI*DTVYSYNIDNISLVGAPL 11
AH +K I D + NI+ ISLVG PL
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPL 836
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 16 GRRPARCYRYCKNKPYPKSRFCRGVPEPK 102
GRRPA Y Y + +P VP+P+
Sbjct: 251 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 279
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 16 GRRPARCYRYCKNKPYPKSRFCRGVPEPK 102
GRRPA Y Y + +P VP+P+
Sbjct: 254 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 282
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 16 GRRPARCYRYCKNKPYPKSRFCRGVPEPK 102
GRRPA Y Y + +P VP+P+
Sbjct: 6875 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6903
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 16 GRRPARCYRYCKNKPYPKSRFCRGVPEPK 102
GRRPA Y Y + +P VP+P+
Sbjct: 6299 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6327
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 16 GRRPARCYRYCKNKPYPKSRFCRGVPEPK 102
GRRPA Y Y + +P VP+P+
Sbjct: 6939 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6967
>U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical
protein F27D9.8b protein.
Length = 515
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 130 RATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 228
+A DD LCV L ++ L+S+ +E I C
Sbjct: 446 QAVADDGKLCVQLSFNDDRSLNSDRIEVKDIEC 478
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 200 RRWKQAVSVATSTS 241
RRWK+ V +AT+TS
Sbjct: 504 RRWKKVVPIATNTS 517
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -3
Query: 247 SLRGTCCNRYGLLPAPQ--NSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLVQAHPDKT 74
S R C+ G PAP + R H+T +G P+ + P V+ H K
Sbjct: 719 SKRNRVCSMEGQSPAPPPISFQVRRHRTYVTASLGQGPIGPNILPGMSPIVPVEIHRGKR 778
Query: 73 EI 68
++
Sbjct: 779 QV 780
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -3
Query: 247 SLRGTCCNRYGLLPAPQ--NSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLVQAHPDKT 74
S R C+ G PAP + R H+T +G P+ + P V+ H K
Sbjct: 719 SKRNRVCSMEGQSPAPPPISFQVRRHRTYVTASLGQGPIGPNILPGMSPIVPVEIHRGKR 778
Query: 73 EI 68
++
Sbjct: 779 QV 780
>Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical
protein H13N06.3b protein.
Length = 439
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 136 TVDDFPLCVHLVSDEYEQLSSEALEAGRI 222
+++DF C++ + + + +++E LE G I
Sbjct: 15 SIEDFKECLYQMQEARKSVTNEILETGHI 43
>Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical
protein H13N06.3a protein.
Length = 468
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 136 TVDDFPLCVHLVSDEYEQLSSEALEAGRI 222
+++DF C++ + + + +++E LE G I
Sbjct: 44 SIEDFKECLYQMQEARKSVTNEILETGHI 72
>AF026204-7|AAB71247.1| 272|Caenorhabditis elegans Hypothetical
protein C30E1.2 protein.
Length = 272
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 128 RERQWMTSHYACT*CLMSTSS*VLRRWKQAVSVATST 238
+E QW+ S C++S + V R K +++ T+T
Sbjct: 104 QENQWIVSPLQTVECVLSEQNNVYRPLKSKLALMTAT 140
>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
protein 17 protein.
Length = 1146
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 77 FVGVCLNQRSVFSTW 121
F+G+CLN + + S W
Sbjct: 666 FIGLCLNSQQLLSIW 680
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,239,049
Number of Sequences: 27780
Number of extensions: 116440
Number of successful extensions: 344
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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