Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H21
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 59 3e-09
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 58 5e-09
10_08_0304 - 16640937-16642877 45 3e-05
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 44 6e-05
03_01_0298 + 2318836-2319051,2321238-2323106 44 8e-05
08_01_0178 - 1509100-1511214 44 1e-04
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 44 1e-04
04_04_0463 - 25397837-25399693,25402136-25402405 43 1e-04
10_08_0303 - 16638379-16640199 43 2e-04
10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655 43 2e-04
02_05_1148 - 34458732-34460627,34462299-34462547 40 0.001
08_01_0177 + 1504472-1505033,1505035-1506647 36 0.021
03_04_0007 + 16265360-16266982 36 0.028
04_01_0006 - 112476-114182,114627-114676,115289-115463 34 0.065
01_06_0025 - 25716563-25718332 33 0.11
03_06_0411 + 33741903-33742163,33742990-33743168,33743342-337434... 31 0.61
01_06_1313 - 36212524-36213669 30 1.4
01_06_1312 - 36205549-36206649,36207558-36207883,36209083-362091... 29 1.8
11_04_0297 + 16050333-16050348,16050564-16052518 28 4.3
09_02_0212 + 5820866-5821031,5821172-5821224,5821512-5821639,582... 28 5.6
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 28 5.6
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 5.6
03_02_0428 - 8375623-8375882,8375965-8376168,8376260-8376497,837... 27 7.5
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 27 9.9
05_02_0156 + 7163756-7163834,7165447-7166225 27 9.9
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 127 VFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF-ESIITVHELSEADKEKT 297
VF++DTSGSM G+ +E +K AMYT L+EL GDYF+II F + + + E EKT
Sbjct: 335 VFIIDTSGSMQGKPLESVKNAMYTTLSELVQGDYFNIITFNDELHSFSSCLEQVNEKT 392
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +1
Query: 118 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 246
K VVFV+DTSGSM G +E +K AM T L+EL GDYF+II F
Sbjct: 333 KAVVFVIDTSGSMQGHPLENVKNAMSTALSELTEGDYFNIITF 375
>10_08_0304 - 16640937-16642877
Length = 646
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM G K+ LK+AM +++ L PGD +I F S
Sbjct: 176 LVTVLDVSGSMVGNKLALLKQAMGFVIDNLGPGDRLCVISFSS 218
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 44.4 bits (100), Expect = 6e-05
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V V+D SGSM G K+E +K+A+ ++ +L P D SI+ FES
Sbjct: 63 LVAVVDVSGSMRGHKIESVKKALQFVIMKLTPVDRLSIVTFES 105
>03_01_0298 + 2318836-2319051,2321238-2323106
Length = 694
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSMSG K+ LK AM ++ L P D S++ F S
Sbjct: 248 LVTVLDVSGSMSGIKLSLLKRAMSFVIQTLGPNDRLSVVAFSS 290
>08_01_0178 - 1509100-1511214
Length = 704
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 246
+V VLD SGSM G K+ LK AM ++++L PGD +++ F
Sbjct: 233 LVTVLDVSGSMEGYKLTLLKRAMGFVIDKLGPGDRLAVVSF 273
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM+G K+ LK AM ++ L P D S+I F S
Sbjct: 179 LVTVLDVSGSMAGTKLALLKRAMGFVIQHLGPSDRLSVIAFSS 221
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM+G K+ LK AM ++ L P D S+I F S
Sbjct: 276 LVTVLDVSGSMAGTKLALLKRAMGFVVQHLGPSDRLSVIAFSS 318
>10_08_0303 - 16638379-16640199
Length = 606
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM+GRK+ +K+AM +++ L P D ++ F +
Sbjct: 145 LVTVLDVSGSMAGRKLALVKKAMGFVIDNLGPADRLCVVSFST 187
>10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655
Length = 719
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD S SM+G K+ LK AM ++ L PGD S++ F S
Sbjct: 262 LVTVLDVSWSMAGTKLALLKRAMSFVIQALGPGDRLSVVTFSS 304
>02_05_1148 - 34458732-34460627,34462299-34462547
Length = 714
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
++ VLD SGSM+G K+ LK AM ++ L D S+I F S
Sbjct: 274 LITVLDVSGSMAGTKLALLKRAMGFVIQNLGSSDRLSVIAFSS 316
>08_01_0177 + 1504472-1505033,1505035-1506647
Length = 724
Score = 35.9 bits (79), Expect = 0.021
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF----ESIITVHELSEADKE 291
+V VLD SGSM G K+ LK AM L PGD +++ F +I + +SE K
Sbjct: 292 LVTVLDVSGSMEGYKLALLKRAM----GLLGPGDRLAVVSFSYSARRVIRLTRMSEGGKA 347
Query: 292 KTR 300
+
Sbjct: 348 SAK 350
>03_04_0007 + 16265360-16266982
Length = 540
Score = 35.5 bits (78), Expect = 0.028
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
++ VLD S SM+G K++++K A+ ++ +L D SI+ F +
Sbjct: 71 LIAVLDVSTSMAGNKLDRMKAALLFVIRKLADVDRLSIVTFSN 113
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 34.3 bits (75), Expect = 0.065
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 246
+V VLD S M G K+ LK M ++ L P D +I+ F
Sbjct: 234 LVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAF 274
>01_06_0025 - 25716563-25718332
Length = 589
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 246
+V V+D SGSM G +++++K A+ ++ +L+ D I+ F
Sbjct: 70 LVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTF 110
>03_06_0411 +
33741903-33742163,33742990-33743168,33743342-33743426,
33743506-33743822,33743983-33744106,33744810-33744902,
33745296-33745364,33745654-33745704,33745705-33745854,
33745904-33746125,33746413-33746568,33746716-33746823,
33746992-33747126,33747209-33747364,33747544-33747664,
33748182-33748267
Length = 770
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNE-LNPGDYFSIIDF 246
V+FV+D SGSM+ +M+ K A +L E D SII F
Sbjct: 570 VIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPF 611
>01_06_1313 - 36212524-36213669
Length = 381
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -1
Query: 452 ATVKAVLMSVPPMDSSLLMIILAFSIFSGVA*Y 354
AT A+L+ VPP D SLL+I L S+ G A Y
Sbjct: 266 ATAMALLVKVPPRDLSLLVINL--SVLEGTAIY 296
>01_06_1312 -
36205549-36206649,36207558-36207883,36209083-36209198,
36210472-36211577
Length = 882
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1
Query: 470 LLMRSTATVKAVLMSVPPMDSSLLMIILAFSIFSGVA*Y 354
LL + AT A+L+ +PP SLL+ IL SI G+A Y
Sbjct: 248 LLSLAVATAGALLVKMPPPALSLLVTIL--SILEGIAIY 284
>11_04_0297 + 16050333-16050348,16050564-16052518
Length = 656
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +1
Query: 1 GVLGQFVVQYDVDRPKDGQILVNDGYFVHFFAPDLPPLNKY----VVFVLDTSGSMSGRK 168
G + F ++Y +D P V G H F PD + Y + V+D +
Sbjct: 430 GKVTSFCIKYSIDIPAMDAKYVPHGRS-HRFYPDQTIDDHYRREVYIGVIDRIHQELENR 488
Query: 169 MEQLKEAMYTILNELNPGDYFSIIDFESIITVHELSEADKE 291
+++ A+ ++ NP D F+ D + I+ + D E
Sbjct: 489 FDEVSMALLLCMSAFNPTDSFASFDAQKILRLASFYPKDIE 529
>09_02_0212 +
5820866-5821031,5821172-5821224,5821512-5821639,
5821728-5821833,5821998-5822132,5822211-5822262,
5822383-5822447,5823984-5824090,5824596-5824792,
5825145-5825260,5825368-5825453,5825525-5825597,
5826886-5826977,5827069-5827207,5827275-5827369,
5827804-5827978,5828345-5828491
Length = 643
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 322 EIQPKLDLVAPYQATPENIEKAKIIISRLESIGGTDINTALTV 450
E+ P DLVA + ++P+ E I+ SIGG D+ L +
Sbjct: 392 ELHP--DLVATHASSPQVFEGHPFIVEAGISIGGKDVKHGLNI 432
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 308 YLYLVFSLSASDSSWTVIIDS--KSMMLK*SPGFSSFNIVYIAS 183
Y YL+ S S S +S ++DS K L PG S + + YI S
Sbjct: 34 YSYLMISTSYSSTSVRFVLDSSGKVQFLSWDPGHSLWAVQYILS 77
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 212 SSFNIVYIASFNCSILRPDMDPDVSRTKTTYLLSGGRSGA 93
+S N+V +A NC IL D+ P + + LS G S A
Sbjct: 485 NSNNLVVLAKSNCDILANDIGPSSCAIENSVHLSVGTSHA 524
>03_02_0428 -
8375623-8375882,8375965-8376168,8376260-8376497,
8376606-8376755,8376842-8377066
Length = 358
Score = 27.5 bits (58), Expect = 7.5
Identities = 33/140 (23%), Positives = 57/140 (40%)
Frame = +1
Query: 1 GVLGQFVVQYDVDRPKDGQILVNDGYFVHFFAPDLPPLNKYVVFVLDTSGSMSGRKMEQL 180
G +G+FV + +D +D ILV G A + L + V++ G + G++ +
Sbjct: 29 GYIGRFVAEACLDSGRDTFILVRPGNACPARAASVDALRQKGAVVIE--GCVGGKEGRKS 86
Query: 181 KEAMYTILNELNPGDYFSIIDFESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQ 360
EA L S++ SI+ L EA + K F +E +D P
Sbjct: 87 VEA---ALRARGVEVVISVMGGASILDQLGLIEAIRAAGTVKRFLPSEFGHDVDRARPVG 143
Query: 361 ATPENIEKAKIIISRLESIG 420
A E+ +++ E+ G
Sbjct: 144 AGLRFYEEKRLVRRAAEASG 163
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = +3
Query: 411 IHWWYRH-QHGLDRSGG 458
IHWWYRH H + + G
Sbjct: 382 IHWWYRHPSHAAELAAG 398
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -2
Query: 148 RTCPGRRRRIC*AA--VGQERRNGRNIHRSLEFVHLSV---DLHHIVQQID 11
R PGRRR C AA G+ ++ ++ +EF S+ D+H + ++D
Sbjct: 131 RRLPGRRRHECEAAPLAGEAKQCATSLESMVEFAASSLGTRDVHAVSTEVD 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.138 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,791,068
Number of Sequences: 37544
Number of extensions: 300599
Number of successful extensions: 768
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -